Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.97□□□□□ -0.33
Ecm1Q61508 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Ecm1Q61508 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.97□□□□□ -0.33
Ecm1Q61508 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Ecm1Q61508 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Ecm1Q61508 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Ecm1Q61508 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.97□□□□□ -0.33
Ecm1Q61508 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.96□□□□□ -0.33
Ecm1Q61508 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ecm1Q61508 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ecm1Q61508 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ecm1Q61508 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ecm1Q61508 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.96□□□□□ -0.33
Ecm1Q61508 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ecm1Q61508 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ecm1Q61508 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ecm1Q61508 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ecm1Q61508 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ecm1Q61508 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.96□□□□□ -0.33
Ecm1Q61508 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ecm1Q61508 Gm22146-201ENSMUST00000157397 288 ntBASIC12.96□□□□□ -0.33
Ecm1Q61508 Gm20392-201ENSMUST00000173047 701 ntBASIC12.96□□□□□ -0.33
Ecm1Q61508 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.96□□□□□ -0.33
Ecm1Q61508 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.96□□□□□ -0.33
Ecm1Q61508 Gm9081-201ENSMUST00000182346 991 ntBASIC12.96□□□□□ -0.33
Ecm1Q61508 Gm5621-201ENSMUST00000187303 640 ntBASIC12.96□□□□□ -0.33
Ecm1Q61508 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.96□□□□□ -0.33
Ecm1Q61508 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC12.96□□□□□ -0.33
Ecm1Q61508 Gm37284-201ENSMUST00000193607 539 ntBASIC12.96□□□□□ -0.33
Ecm1Q61508 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.96□□□□□ -0.33
Ecm1Q61508 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.96□□□□□ -0.33
Ecm1Q61508 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.96□□□□□ -0.33
Ecm1Q61508 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.96□□□□□ -0.33
Ecm1Q61508 Gm18065-201ENSMUST00000221395 526 ntBASIC12.96□□□□□ -0.33
Ecm1Q61508 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ecm1Q61508 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ecm1Q61508 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ecm1Q61508 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ecm1Q61508 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ecm1Q61508 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ecm1Q61508 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ecm1Q61508 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ecm1Q61508 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ecm1Q61508 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ecm1Q61508 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ecm1Q61508 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ecm1Q61508 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.96□□□□□ -0.34
Ecm1Q61508 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.96□□□□□ -0.34
Ecm1Q61508 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ecm1Q61508 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ecm1Q61508 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ecm1Q61508 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ecm1Q61508 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ecm1Q61508 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ecm1Q61508 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ecm1Q61508 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ecm1Q61508 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ecm1Q61508 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ecm1Q61508 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ecm1Q61508 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.95□□□□□ -0.34
Ecm1Q61508 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ecm1Q61508 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ecm1Q61508 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ecm1Q61508 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ecm1Q61508 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ecm1Q61508 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.95□□□□□ -0.34
Ecm1Q61508 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ecm1Q61508 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ecm1Q61508 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ecm1Q61508 Gm14071-201ENSMUST00000117817 509 ntBASIC12.95□□□□□ -0.34
Ecm1Q61508 Gm15528-201ENSMUST00000117821 864 ntBASIC12.95□□□□□ -0.34
Ecm1Q61508 Gm11500-201ENSMUST00000118237 601 ntBASIC12.95□□□□□ -0.34
Ecm1Q61508 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ecm1Q61508 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ecm1Q61508 Gm17192-201ENSMUST00000169031 511 ntBASIC12.95□□□□□ -0.34
Ecm1Q61508 Gm26989-201ENSMUST00000182608 749 ntBASIC12.95□□□□□ -0.34
Ecm1Q61508 Mir7051-201ENSMUST00000184167 73 ntBASIC12.95□□□□□ -0.34
Ecm1Q61508 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ecm1Q61508 Gm18776-201ENSMUST00000188833 654 ntBASIC12.95□□□□□ -0.34
Ecm1Q61508 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC12.95□□□□□ -0.34
Ecm1Q61508 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.95□□□□□ -0.34
Ecm1Q61508 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ecm1Q61508 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ecm1Q61508 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ecm1Q61508 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ecm1Q61508 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ecm1Q61508 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ecm1Q61508 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ecm1Q61508 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ecm1Q61508 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ecm1Q61508 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ecm1Q61508 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ecm1Q61508 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ecm1Q61508 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ecm1Q61508 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms