Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
ClpbQ60649 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ClpbQ60649 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ClpbQ60649 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ClpbQ60649 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.31□□□□□ -0.6
ClpbQ60649 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
ClpbQ60649 Gm17040-202ENSMUST00000170597 889 ntBASIC11.31□□□□□ -0.6
ClpbQ60649 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
ClpbQ60649 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.31□□□□□ -0.6
ClpbQ60649 Gm37666-201ENSMUST00000194110 866 ntBASIC11.31□□□□□ -0.6
ClpbQ60649 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.31□□□□□ -0.6
ClpbQ60649 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.31□□□□□ -0.6
ClpbQ60649 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
ClpbQ60649 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.31□□□□□ -0.6
ClpbQ60649 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
ClpbQ60649 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ClpbQ60649 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.31□□□□□ -0.6
ClpbQ60649 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.31□□□□□ -0.6
ClpbQ60649 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ClpbQ60649 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.31□□□□□ -0.6
ClpbQ60649 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ClpbQ60649 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ClpbQ60649 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
ClpbQ60649 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ClpbQ60649 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ClpbQ60649 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
ClpbQ60649 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
ClpbQ60649 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
ClpbQ60649 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ClpbQ60649 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ClpbQ60649 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
ClpbQ60649 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ClpbQ60649 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ClpbQ60649 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
ClpbQ60649 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ClpbQ60649 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ClpbQ60649 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
ClpbQ60649 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClpbQ60649 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ClpbQ60649 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
ClpbQ60649 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ClpbQ60649 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ClpbQ60649 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClpbQ60649 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClpbQ60649 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ClpbQ60649 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClpbQ60649 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ClpbQ60649 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClpbQ60649 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
ClpbQ60649 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.3□□□□□ -0.6
ClpbQ60649 Gm23949-201ENSMUST00000104027 127 ntBASIC11.3□□□□□ -0.6
ClpbQ60649 Gm15711-201ENSMUST00000118889 535 ntBASIC11.3□□□□□ -0.6
ClpbQ60649 Gm7722-201ENSMUST00000120646 741 ntBASIC11.3□□□□□ -0.6
ClpbQ60649 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClpbQ60649 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
ClpbQ60649 Gm5706-201ENSMUST00000181525 993 ntBASIC11.3□□□□□ -0.6
ClpbQ60649 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.3□□□□□ -0.6
ClpbQ60649 Gm18038-201ENSMUST00000197900 485 ntBASIC11.3□□□□□ -0.6
ClpbQ60649 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClpbQ60649 Gm5455-201ENSMUST00000058710 715 ntBASIC11.3□□□□□ -0.6
ClpbQ60649 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
ClpbQ60649 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
ClpbQ60649 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ClpbQ60649 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClpbQ60649 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClpbQ60649 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.3□□□□□ -0.6
ClpbQ60649 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
ClpbQ60649 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClpbQ60649 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClpbQ60649 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.3□□□□□ -0.6
ClpbQ60649 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClpbQ60649 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ClpbQ60649 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ClpbQ60649 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.3□□□□□ -0.6
ClpbQ60649 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClpbQ60649 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClpbQ60649 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClpbQ60649 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClpbQ60649 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClpbQ60649 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.29□□□□□ -0.6
ClpbQ60649 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ClpbQ60649 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClpbQ60649 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ClpbQ60649 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClpbQ60649 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.29□□□□□ -0.6
ClpbQ60649 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClpbQ60649 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClpbQ60649 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClpbQ60649 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
ClpbQ60649 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ClpbQ60649 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClpbQ60649 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClpbQ60649 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.29□□□□□ -0.6
ClpbQ60649 Gm12380-201ENSMUST00000119012 544 ntBASIC11.29□□□□□ -0.6
ClpbQ60649 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.29□□□□□ -0.6
ClpbQ60649 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
ClpbQ60649 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ClpbQ60649 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.29□□□□□ -0.6
ClpbQ60649 Mir7677-201ENSMUST00000184226 67 ntBASIC11.29□□□□□ -0.6
ClpbQ60649 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms