Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nr1h4Q60641 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nr1h4Q60641 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nr1h4Q60641 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nr1h4Q60641 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.21□□□□□ -0.61
Nr1h4Q60641 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nr1h4Q60641 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Nr1h4Q60641 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nr1h4Q60641 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nr1h4Q60641 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nr1h4Q60641 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Nr1h4Q60641 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nr1h4Q60641 Gm6023-201ENSMUST00000118217 606 ntBASIC11.21□□□□□ -0.61
Nr1h4Q60641 Gm5419-201ENSMUST00000119301 527 ntBASIC11.21□□□□□ -0.61
Nr1h4Q60641 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nr1h4Q60641 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.21□□□□□ -0.61
Nr1h4Q60641 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nr1h4Q60641 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.21□□□□□ -0.61
Nr1h4Q60641 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Nr1h4Q60641 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nr1h4Q60641 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nr1h4Q60641 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.21□□□□□ -0.61
Nr1h4Q60641 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.21□□□□□ -0.61
Nr1h4Q60641 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.21□□□□□ -0.61
Nr1h4Q60641 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Nr1h4Q60641 Gm19994-201ENSMUST00000217086 586 ntBASIC11.21□□□□□ -0.61
Nr1h4Q60641 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.21□□□□□ -0.61
Nr1h4Q60641 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nr1h4Q60641 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.21□□□□□ -0.61
Nr1h4Q60641 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nr1h4Q60641 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Nr1h4Q60641 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nr1h4Q60641 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nr1h4Q60641 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Nr1h4Q60641 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Nr1h4Q60641 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.21□□□□□ -0.62
Nr1h4Q60641 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nr1h4Q60641 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Nr1h4Q60641 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
Nr1h4Q60641 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Nr1h4Q60641 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nr1h4Q60641 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Nr1h4Q60641 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.2□□□□□ -0.62
Nr1h4Q60641 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Gm17150-201ENSMUST00000165577 381 ntBASIC11.2□□□□□ -0.62
Nr1h4Q60641 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.2□□□□□ -0.62
Nr1h4Q60641 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.2□□□□□ -0.62
Nr1h4Q60641 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nr1h4Q60641 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.19□□□□□ -0.62
Nr1h4Q60641 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.19□□□□□ -0.62
Nr1h4Q60641 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms