Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ccdc85aQ5SP85 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc85aQ5SP85 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc85aQ5SP85 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ccdc85aQ5SP85 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc85aQ5SP85 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc85aQ5SP85 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Gm11470-201ENSMUST00000118868 1475 ntBASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Gm11244-201ENSMUST00000121243 237 ntBASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Gm13899-201ENSMUST00000121519 1255 ntBASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Gm8459-201ENSMUST00000162504 760 ntBASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Gm18558-201ENSMUST00000186253 1214 ntBASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Gm5700-201ENSMUST00000191483 989 ntBASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 AC114645.1-201ENSMUST00000215831 187 ntBASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Gm18968-201ENSMUST00000221319 862 ntBASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Gm8894-201ENSMUST00000074642 666 ntBASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc85aQ5SP85 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Gm11979-201ENSMUST00000119629 743 ntBASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Gm8451-201ENSMUST00000170338 447 ntBASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Gm28941-201ENSMUST00000185536 1017 ntBASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Ighv1-2-201ENSMUST00000195325 378 ntBASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Gm5870-201ENSMUST00000196461 282 ntBASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Gm45856-201ENSMUST00000212752 416 ntBASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 CT009546.1-201ENSMUST00000222573 1120 ntBASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Gm7536-201ENSMUST00000077389 444 ntBASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Gm5453-201ENSMUST00000080866 447 ntBASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc85aQ5SP85 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms