Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Gm15004-201ENSMUST00000119192 630 ntBASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Gm11700-201ENSMUST00000119409 403 ntBASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Gm13665-201ENSMUST00000120830 528 ntBASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Gm26361-201ENSMUST00000158868 186 ntBASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Gm25890-201ENSMUST00000177643 165 ntBASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Gm22614-201ENSMUST00000178300 165 ntBASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Gm9192-201ENSMUST00000183221 985 ntBASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Gm6082-201ENSMUST00000215204 454 ntBASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Gm22042-201ENSMUST00000082989 165 ntBASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Gm26110-201ENSMUST00000083971 165 ntBASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.09□□□□□ -0.79
Trav5d-4Q5R1F6 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Gm22133-201ENSMUST00000102082 109 ntBASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Gm26286-201ENSMUST00000104166 134 ntBASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Gm25668-201ENSMUST00000157700 129 ntBASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Gm17812-201ENSMUST00000204935 318 ntBASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5d-4Q5R1F6 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms