Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Mir680-2-201ENSMUST00000102163 110 ntBASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Gm23251-201ENSMUST00000103773 110 ntBASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Gm24891-201ENSMUST00000104391 136 ntBASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Gm13916-201ENSMUST00000117368 628 ntBASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Gm8459-201ENSMUST00000162504 760 ntBASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Gm18065-201ENSMUST00000221395 526 ntBASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nhlrc4Q3UP44 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Nhlrc4Q3UP44 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nhlrc4Q3UP44 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nhlrc4Q3UP44 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Nhlrc4Q3UP44 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nhlrc4Q3UP44 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Nhlrc4Q3UP44 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Nhlrc4Q3UP44 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Gm14071-201ENSMUST00000117817 509 ntBASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Gm8731-201ENSMUST00000118088 412 ntBASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Gm11941-201ENSMUST00000119904 610 ntBASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Mir5120-201ENSMUST00000175020 78 ntBASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Gm37466-201ENSMUST00000195692 652 ntBASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Gm9555-201ENSMUST00000200908 583 ntBASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Gm19208-201ENSMUST00000213861 912 ntBASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nhlrc4Q3UP44 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Nhlrc4Q3UP44 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nhlrc4Q3UP44 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nhlrc4Q3UP44 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.76□□□□□ -0.69
Nhlrc4Q3UP44 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nhlrc4Q3UP44 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Nhlrc4Q3UP44 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.76□□□□□ -0.69
Nhlrc4Q3UP44 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nhlrc4Q3UP44 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nhlrc4Q3UP44 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nhlrc4Q3UP44 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nhlrc4Q3UP44 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nhlrc4Q3UP44 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Nhlrc4Q3UP44 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nhlrc4Q3UP44 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms