Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Gm13600-201ENSMUST00000117949 744 ntBASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Upf3aQ3ULJ3 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Gm12030-201ENSMUST00000121917 223 ntBASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upf3aQ3ULJ3 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.34□□□□□ -0.43
Upf3aQ3ULJ3 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upf3aQ3ULJ3 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upf3aQ3ULJ3 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Upf3aQ3ULJ3 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Upf3aQ3ULJ3 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Upf3aQ3ULJ3 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upf3aQ3ULJ3 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Upf3aQ3ULJ3 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Upf3aQ3ULJ3 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upf3aQ3ULJ3 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upf3aQ3ULJ3 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Upf3aQ3ULJ3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Upf3aQ3ULJ3 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upf3aQ3ULJ3 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upf3aQ3ULJ3 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Upf3aQ3ULJ3 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Upf3aQ3ULJ3 Gm12247-201ENSMUST00000117585 670 ntBASIC12.34□□□□□ -0.43
Upf3aQ3ULJ3 Gm14395-201ENSMUST00000120494 563 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms