Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 AC102523.1-201ENSMUST00000228706 1144 ntBASIC10.78□□□□□ -0.68
Spg11Q3UHA3 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Spg11Q3UHA3 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Spg11Q3UHA3 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Spg11Q3UHA3 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Spg11Q3UHA3 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Spg11Q3UHA3 Gm11191-201ENSMUST00000117231 610 ntBASIC10.77□□□□□ -0.68
Spg11Q3UHA3 Gm21778-201ENSMUST00000178779 471 ntBASIC10.77□□□□□ -0.68
Spg11Q3UHA3 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Spg11Q3UHA3 Gm5254-201ENSMUST00000188353 977 ntBASIC10.77□□□□□ -0.68
Spg11Q3UHA3 BB187690-201ENSMUST00000198619 1176 ntBASIC10.77□□□□□ -0.68
Spg11Q3UHA3 Gm18164-201ENSMUST00000213769 927 ntBASIC10.77□□□□□ -0.68
Spg11Q3UHA3 Gm18166-201ENSMUST00000215557 927 ntBASIC10.77□□□□□ -0.68
Spg11Q3UHA3 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Spg11Q3UHA3 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Spg11Q3UHA3 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Spg11Q3UHA3 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Spg11Q3UHA3 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.68
Spg11Q3UHA3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Spg11Q3UHA3 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Spg11Q3UHA3 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Spg11Q3UHA3 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.77□□□□□ -0.69
Spg11Q3UHA3 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Spg11Q3UHA3 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Spg11Q3UHA3 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Spg11Q3UHA3 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Spg11Q3UHA3 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.77□□□□□ -0.69
Spg11Q3UHA3 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.77□□□□□ -0.69
Spg11Q3UHA3 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Spg11Q3UHA3 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Spg11Q3UHA3 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC10.77□□□□□ -0.69
Spg11Q3UHA3 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC10.77□□□□□ -0.69
Spg11Q3UHA3 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC10.77□□□□□ -0.69
Spg11Q3UHA3 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Spg11Q3UHA3 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Spg11Q3UHA3 Gm44323-201ENSMUST00000198689 129 ntBASIC10.77□□□□□ -0.69
Spg11Q3UHA3 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC10.77□□□□□ -0.69
Spg11Q3UHA3 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Spg11Q3UHA3 Gm5178-201ENSMUST00000219380 898 ntBASIC10.77□□□□□ -0.69
Spg11Q3UHA3 AC115304.2-201ENSMUST00000226399 332 ntBASIC10.77□□□□□ -0.69
Spg11Q3UHA3 AC159006.3-201ENSMUST00000226918 664 ntBASIC10.77□□□□□ -0.69
Spg11Q3UHA3 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.77□□□□□ -0.69
Spg11Q3UHA3 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Spg11Q3UHA3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Spg11Q3UHA3 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Spg11Q3UHA3 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Spg11Q3UHA3 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Spg11Q3UHA3 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Spg11Q3UHA3 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Spg11Q3UHA3 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Spg11Q3UHA3 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Spg11Q3UHA3 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Spg11Q3UHA3 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 CT009550.1-201ENSMUST00000225750 864 ntBASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Gm44414-201ENSMUST00000203660 2109 ntBASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Spg11Q3UHA3 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms