Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Gm22323-201ENSMUST00000103832 109 ntBASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Gm11960-201ENSMUST00000122068 925 ntBASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Brf2Q3UAW9 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Gm17376-201ENSMUST00000166016 84 ntBASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Gm7584-201ENSMUST00000175829 940 ntBASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Gm29615-201ENSMUST00000185371 697 ntBASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Gm28224-201ENSMUST00000186078 697 ntBASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Gm29001-201ENSMUST00000186177 697 ntBASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Gm28292-201ENSMUST00000186593 697 ntBASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Gm28101-201ENSMUST00000187608 697 ntBASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Gm29076-201ENSMUST00000187689 697 ntBASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Gm28302-201ENSMUST00000187931 697 ntBASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Gm28646-201ENSMUST00000188220 697 ntBASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Gm28205-201ENSMUST00000189177 697 ntBASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Gm29032-201ENSMUST00000189797 697 ntBASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Gm28695-201ENSMUST00000190300 697 ntBASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Brf2Q3UAW9 Gm37448-201ENSMUST00000192795 697 ntBASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms