Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccbe1Q3MI99 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC10.68□□□□□ -0.7
Ccbe1Q3MI99 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Ccbe1Q3MI99 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccbe1Q3MI99 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Xpnpep3-201ENSMUST00000041609 3236 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Gm11524-201ENSMUST00000119349 807 ntBASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Gm16296-201ENSMUST00000159905 325 ntBASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Gm28693-202ENSMUST00000190758 331 ntBASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Gm6266-201ENSMUST00000203844 806 ntBASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Gm19078-201ENSMUST00000206311 727 ntBASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Gm807-202ENSMUST00000224929 408 ntBASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccbe1Q3MI99 Olfr1219-203ENSMUST00000214442 3694 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Gm9022-201ENSMUST00000182482 992 ntBASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Gm18062-201ENSMUST00000208020 547 ntBASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Gm6007-201ENSMUST00000208170 823 ntBASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Gm18055-201ENSMUST00000208254 547 ntBASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.66□□□□□ -0.7
Ccbe1Q3MI99 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms