Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Pkd1l3Q2EG98 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Pkd1l3Q2EG98 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Pkd1l3Q2EG98 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pkd1l3Q2EG98 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Pkd1l3Q2EG98 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pkd1l3Q2EG98 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pkd1l3Q2EG98 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.55□□□□□ -0.72
Pkd1l3Q2EG98 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Pkd1l3Q2EG98 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pkd1l3Q2EG98 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pkd1l3Q2EG98 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pkd1l3Q2EG98 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pkd1l3Q2EG98 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.55□□□□□ -0.72
Pkd1l3Q2EG98 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 AC121805.2-201ENSMUST00000218808 2538 ntBASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Gm44329-201ENSMUST00000197469 112 ntBASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Gm44124-201ENSMUST00000204159 472 ntBASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 CT485606.1-201ENSMUST00000213187 878 ntBASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Gm17213-201ENSMUST00000165161 1360 ntBASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pkd1l3Q2EG98 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Gm7150-201ENSMUST00000122032 981 ntBASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Gm19287-201ENSMUST00000203190 358 ntBASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Gm45594-201ENSMUST00000211717 241 ntBASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1l3Q2EG98 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms