Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxc4Q08624 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxc4Q08624 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxc4Q08624 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxc4Q08624 Mir1901-201ENSMUST00000122616 78 ntBASIC11.29□□□□□ -0.6
Hoxc4Q08624 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.29□□□□□ -0.6
Hoxc4Q08624 Gm20495-201ENSMUST00000173902 235 ntBASIC11.29□□□□□ -0.6
Hoxc4Q08624 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Hoxc4Q08624 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxc4Q08624 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.29□□□□□ -0.6
Hoxc4Q08624 Gm2875-201ENSMUST00000211333 360 ntBASIC11.29□□□□□ -0.6
Hoxc4Q08624 Gm10752-201ENSMUST00000218348 729 ntBASIC11.29□□□□□ -0.6
Hoxc4Q08624 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Hoxc4Q08624 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.29□□□□□ -0.6
Hoxc4Q08624 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.29□□□□□ -0.6
Hoxc4Q08624 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Hoxc4Q08624 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxc4Q08624 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Hoxc4Q08624 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxc4Q08624 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxc4Q08624 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxc4Q08624 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxc4Q08624 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxc4Q08624 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxc4Q08624 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxc4Q08624 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxc4Q08624 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Hoxc4Q08624 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxc4Q08624 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Gm14071-201ENSMUST00000117817 509 ntBASIC11.28□□□□□ -0.6
Hoxc4Q08624 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Gm27438-201ENSMUST00000183480 110 ntBASIC11.28□□□□□ -0.6
Hoxc4Q08624 Gm45219-201ENSMUST00000205602 465 ntBASIC11.28□□□□□ -0.6
Hoxc4Q08624 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.28□□□□□ -0.6
Hoxc4Q08624 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.28□□□□□ -0.6
Hoxc4Q08624 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc4Q08624 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hoxc4Q08624 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.27□□□□□ -0.6
Hoxc4Q08624 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hoxc4Q08624 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hoxc4Q08624 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Hoxc4Q08624 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hoxc4Q08624 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.27□□□□□ -0.6
Hoxc4Q08624 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Hoxc4Q08624 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hoxc4Q08624 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc4Q08624 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.27□□□□□ -0.61
Hoxc4Q08624 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc4Q08624 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc4Q08624 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
Hoxc4Q08624 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc4Q08624 Gm14395-201ENSMUST00000120494 563 ntBASIC11.27□□□□□ -0.61
Hoxc4Q08624 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.27□□□□□ -0.61
Hoxc4Q08624 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.27□□□□□ -0.61
Hoxc4Q08624 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms