Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Cdx4Q07424 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Cdx4Q07424 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 Gm38273-201ENSMUST00000194987 2382 ntBASIC9.12□□□□□ -0.95
Cdx4Q07424 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Cdx4Q07424 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Cdx4Q07424 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
Cdx4Q07424 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Cdx4Q07424 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 Gm6963-201ENSMUST00000147879 379 ntBASIC9.12□□□□□ -0.95
Cdx4Q07424 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Cdx4Q07424 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 Gm24845-201ENSMUST00000158034 109 ntBASIC9.12□□□□□ -0.95
Cdx4Q07424 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC9.12□□□□□ -0.95
Cdx4Q07424 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC9.12□□□□□ -0.95
Cdx4Q07424 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Cdx4Q07424 Gm27627-201ENSMUST00000183644 150 ntBASIC9.12□□□□□ -0.95
Cdx4Q07424 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC9.12□□□□□ -0.95
Cdx4Q07424 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC9.12□□□□□ -0.95
Cdx4Q07424 Gm28450-201ENSMUST00000187349 638 ntBASIC9.12□□□□□ -0.95
Cdx4Q07424 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 Gm45433-201ENSMUST00000209386 247 ntBASIC9.12□□□□□ -0.95
Cdx4Q07424 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC9.12□□□□□ -0.95
Cdx4Q07424 AC154252.2-201ENSMUST00000223593 767 ntBASIC9.12□□□□□ -0.95
Cdx4Q07424 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC9.12□□□□□ -0.95
Cdx4Q07424 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC9.12□□□□□ -0.95
Cdx4Q07424 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Cdx4Q07424 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Cdx4Q07424 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.95
Cdx4Q07424 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Cdx4Q07424 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC9.12□□□□□ -0.95
Cdx4Q07424 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx4Q07424 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Cdx4Q07424 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC9.11□□□□□ -0.95
Cdx4Q07424 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC9.11□□□□□ -0.95
Cdx4Q07424 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Cdx4Q07424 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
Cdx4Q07424 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Cdx4Q07424 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Cdx4Q07424 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC9.11□□□□□ -0.95
Cdx4Q07424 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 Gm12015-201ENSMUST00000117065 843 ntBASIC9.11□□□□□ -0.95
Cdx4Q07424 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC9.11□□□□□ -0.95
Cdx4Q07424 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
Cdx4Q07424 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC9.11□□□□□ -0.95
Cdx4Q07424 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Cdx4Q07424 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC9.11□□□□□ -0.95
Cdx4Q07424 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Cdx4Q07424 Gm29615-201ENSMUST00000185371 697 ntBASIC9.11□□□□□ -0.95
Cdx4Q07424 Gm28224-201ENSMUST00000186078 697 ntBASIC9.11□□□□□ -0.95
Cdx4Q07424 Gm29001-201ENSMUST00000186177 697 ntBASIC9.11□□□□□ -0.95
Cdx4Q07424 Gm28292-201ENSMUST00000186593 697 ntBASIC9.11□□□□□ -0.95
Cdx4Q07424 Gm28101-201ENSMUST00000187608 697 ntBASIC9.11□□□□□ -0.95
Cdx4Q07424 Gm29076-201ENSMUST00000187689 697 ntBASIC9.11□□□□□ -0.95
Cdx4Q07424 Gm28302-201ENSMUST00000187931 697 ntBASIC9.11□□□□□ -0.95
Cdx4Q07424 Gm28646-201ENSMUST00000188220 697 ntBASIC9.11□□□□□ -0.95
Cdx4Q07424 Gm28205-201ENSMUST00000189177 697 ntBASIC9.11□□□□□ -0.95
Cdx4Q07424 Gm29032-201ENSMUST00000189797 697 ntBASIC9.11□□□□□ -0.95
Cdx4Q07424 Gm28695-201ENSMUST00000190300 697 ntBASIC9.11□□□□□ -0.95
Cdx4Q07424 Gm37448-201ENSMUST00000192795 697 ntBASIC9.11□□□□□ -0.95
Cdx4Q07424 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms