Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cntn3Q07409 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn3Q07409 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cntn3Q07409 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cntn3Q07409 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.34□□□□□ -0.43
Cntn3Q07409 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.34□□□□□ -0.43
Cntn3Q07409 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.34□□□□□ -0.43
Cntn3Q07409 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.34□□□□□ -0.43
Cntn3Q07409 Gm15207-201ENSMUST00000119259 442 ntBASIC12.34□□□□□ -0.43
Cntn3Q07409 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
Cntn3Q07409 Gm24514-201ENSMUST00000174961 285 ntBASIC12.34□□□□□ -0.43
Cntn3Q07409 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.34□□□□□ -0.43
Cntn3Q07409 Gm37835-201ENSMUST00000193305 361 ntBASIC12.34□□□□□ -0.43
Cntn3Q07409 Mir7686-201ENSMUST00000200604 57 ntBASIC12.34□□□□□ -0.43
Cntn3Q07409 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.34□□□□□ -0.43
Cntn3Q07409 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cntn3Q07409 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.34□□□□□ -0.43
Cntn3Q07409 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cntn3Q07409 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cntn3Q07409 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Cntn3Q07409 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Cntn3Q07409 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cntn3Q07409 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.34□□□□□ -0.43
Cntn3Q07409 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.34□□□□□ -0.43
Cntn3Q07409 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cntn3Q07409 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cntn3Q07409 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cntn3Q07409 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Cntn3Q07409 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cntn3Q07409 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cntn3Q07409 Cog3-203ENSMUST00000227473 4197 ntBASIC12.33□□□□□ -0.44
Cntn3Q07409 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cntn3Q07409 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cntn3Q07409 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cntn3Q07409 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.33□□□□□ -0.44
Cntn3Q07409 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cntn3Q07409 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cntn3Q07409 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.33□□□□□ -0.44
Cntn3Q07409 Gm38117-201ENSMUST00000194653 939 ntBASIC12.33□□□□□ -0.44
Cntn3Q07409 Gm45770-201ENSMUST00000212105 616 ntBASIC12.33□□□□□ -0.44
Cntn3Q07409 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.33□□□□□ -0.44
Cntn3Q07409 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.33□□□□□ -0.44
Cntn3Q07409 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.33□□□□□ -0.44
Cntn3Q07409 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cntn3Q07409 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cntn3Q07409 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cntn3Q07409 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cntn3Q07409 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cntn3Q07409 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.33□□□□□ -0.44
Cntn3Q07409 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Cntn3Q07409 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cntn3Q07409 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cntn3Q07409 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cntn3Q07409 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cntn3Q07409 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cntn3Q07409 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cntn3Q07409 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.33□□□□□ -0.44
Cntn3Q07409 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cntn3Q07409 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cntn3Q07409 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cntn3Q07409 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cntn3Q07409 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cntn3Q07409 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cntn3Q07409 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.33□□□□□ -0.44
Cntn3Q07409 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cntn3Q07409 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Cntn3Q07409 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Cntn3Q07409 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Cntn3Q07409 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cntn3Q07409 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms