Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Gm9211-201ENSMUST00000182882 975 ntBASIC11.67□□□□□ -0.54
Atf4Q06507 Tac1-203ENSMUST00000184986 691 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC11.67□□□□□ -0.54
Atf4Q06507 Gm19214-201ENSMUST00000191956 1083 ntBASIC11.67□□□□□ -0.54
Atf4Q06507 Gm37724-201ENSMUST00000195240 1221 ntBASIC11.67□□□□□ -0.54
Atf4Q06507 Gm38268-201ENSMUST00000195813 193 ntBASIC11.67□□□□□ -0.54
Atf4Q06507 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.67□□□□□ -0.54
Atf4Q06507 1700102F20Rik-201ENSMUST00000203859 670 ntBASIC11.67□□□□□ -0.54
Atf4Q06507 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.67□□□□□ -0.54
Atf4Q06507 Gm44656-201ENSMUST00000208428 490 ntBASIC11.67□□□□□ -0.54
Atf4Q06507 Gm45259-201ENSMUST00000209217 1006 ntBASIC11.67□□□□□ -0.54
Atf4Q06507 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.67□□□□□ -0.54
Atf4Q06507 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC11.67□□□□□ -0.54
Atf4Q06507 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.67□□□□□ -0.54
Atf4Q06507 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.67□□□□□ -0.54
Atf4Q06507 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Atf4Q06507 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 Nrxn1-225ENSMUST00000197268 2280 ntTSL 3 BASIC11.67□□□□□ -0.54
Atf4Q06507 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 1700016H13Rik-202ENSMUST00000119824 1447 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Atf4Q06507 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.67□□□□□ -0.54
Atf4Q06507 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.67□□□□□ -0.54
Atf4Q06507 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Atf4Q06507 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.67□□□□□ -0.54
Atf4Q06507 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.67□□□□□ -0.54
Atf4Q06507 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Atf4Q06507 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Atf4Q06507 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Atf4Q06507 Gm13492-201ENSMUST00000119772 665 ntBASIC11.66□□□□□ -0.54
Atf4Q06507 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Gm14612-201ENSMUST00000121522 881 ntBASIC11.66□□□□□ -0.54
Atf4Q06507 Gm15938-201ENSMUST00000150079 635 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC11.66□□□□□ -0.54
Atf4Q06507 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.66□□□□□ -0.54
Atf4Q06507 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Atf4Q06507 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Atf4Q06507 Gm27468-201ENSMUST00000183577 106 ntBASIC11.66□□□□□ -0.54
Atf4Q06507 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.66□□□□□ -0.54
Atf4Q06507 Gm5051-201ENSMUST00000204085 485 ntBASIC11.66□□□□□ -0.54
Atf4Q06507 Gm6290-201ENSMUST00000207666 1158 ntBASIC11.66□□□□□ -0.54
Atf4Q06507 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.66□□□□□ -0.54
Atf4Q06507 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC11.66□□□□□ -0.54
Atf4Q06507 AC134439.1-201ENSMUST00000220923 600 ntBASIC11.66□□□□□ -0.54
Atf4Q06507 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC11.66□□□□□ -0.54
Atf4Q06507 AC173482.2-201ENSMUST00000224044 750 ntBASIC11.66□□□□□ -0.54
Atf4Q06507 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Atf4Q06507 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Atf4Q06507 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Atf4Q06507 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Atf4Q06507 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Atf4Q06507 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.66□□□□□ -0.54
Atf4Q06507 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf4Q06507 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms