Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Sox9Q04887 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox9Q04887 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox9Q04887 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Sox9Q04887 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox9Q04887 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox9Q04887 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox9Q04887 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox9Q04887 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox9Q04887 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.18□□□□□ -0.46
Sox9Q04887 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
Sox9Q04887 Gm24279-201ENSMUST00000104236 131 ntBASIC12.18□□□□□ -0.46
Sox9Q04887 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sox9Q04887 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox9Q04887 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox9Q04887 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox9Q04887 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Sox9Q04887 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Sox9Q04887 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.18□□□□□ -0.46
Sox9Q04887 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox9Q04887 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox9Q04887 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.18□□□□□ -0.46
Sox9Q04887 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.18□□□□□ -0.46
Sox9Q04887 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.18□□□□□ -0.46
Sox9Q04887 Gm37444-201ENSMUST00000193605 439 ntBASIC12.18□□□□□ -0.46
Sox9Q04887 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox9Q04887 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.18□□□□□ -0.46
Sox9Q04887 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.18□□□□□ -0.46
Sox9Q04887 AC138716.2-201ENSMUST00000226670 1016 ntBASIC12.18□□□□□ -0.46
Sox9Q04887 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox9Q04887 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox9Q04887 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sox9Q04887 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sox9Q04887 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.18□□□□□ -0.46
Sox9Q04887 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.18□□□□□ -0.46
Sox9Q04887 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox9Q04887 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sox9Q04887 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox9Q04887 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC12.18□□□□□ -0.46
Sox9Q04887 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox9Q04887 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox9Q04887 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox9Q04887 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Sox9Q04887 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Sox9Q04887 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sox9Q04887 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox9Q04887 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
Sox9Q04887 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox9Q04887 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox9Q04887 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox9Q04887 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox9Q04887 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox9Q04887 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox9Q04887 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox9Q04887 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC12.17□□□□□ -0.46
Sox9Q04887 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sox9Q04887 Gm9625-201ENSMUST00000180422 955 ntBASIC12.17□□□□□ -0.46
Sox9Q04887 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12.17□□□□□ -0.46
Sox9Q04887 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.17□□□□□ -0.46
Sox9Q04887 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC12.17□□□□□ -0.46
Sox9Q04887 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox9Q04887 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox9Q04887 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Sox9Q04887 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.17□□□□□ -0.46
Sox9Q04887 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox9Q04887 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sox9Q04887 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox9Q04887 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox9Q04887 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox9Q04887 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox9Q04887 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.17□□□□□ -0.46
Sox9Q04887 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.17□□□□□ -0.46
Sox9Q04887 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox9Q04887 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.17□□□□□ -0.46
Sox9Q04887 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox9Q04887 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sox9Q04887 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox9Q04887 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Sox9Q04887 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox9Q04887 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox9Q04887 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox9Q04887 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.16□□□□□ -0.46
Sox9Q04887 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sox9Q04887 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.16□□□□□ -0.46
Sox9Q04887 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.16□□□□□ -0.46
Sox9Q04887 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Sox9Q04887 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sox9Q04887 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms