Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smn1P97801 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smn1P97801 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smn1P97801 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smn1P97801 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.05□□□□□ -0.8
Smn1P97801 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.05□□□□□ -0.8
Smn1P97801 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smn1P97801 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smn1P97801 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smn1P97801 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.05□□□□□ -0.8
Smn1P97801 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smn1P97801 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smn1P97801 Gm5419-201ENSMUST00000119301 527 ntBASIC10.05□□□□□ -0.8
Smn1P97801 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.05□□□□□ -0.8
Smn1P97801 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smn1P97801 Gm24845-201ENSMUST00000158034 109 ntBASIC10.05□□□□□ -0.8
Smn1P97801 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.05□□□□□ -0.8
Smn1P97801 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smn1P97801 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smn1P97801 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Smn1P97801 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smn1P97801 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smn1P97801 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smn1P97801 BC043934-202ENSMUST00000185694 2356 ntBASIC10.05□□□□□ -0.8
Smn1P97801 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smn1P97801 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smn1P97801 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smn1P97801 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smn1P97801 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smn1P97801 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smn1P97801 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smn1P97801 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smn1P97801 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smn1P97801 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smn1P97801 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.05□□□□□ -0.8
Smn1P97801 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.05□□□□□ -0.8
Smn1P97801 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC10.05□□□□□ -0.8
Smn1P97801 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Smn1P97801 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smn1P97801 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Smn1P97801 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Smn1P97801 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.04□□□□□ -0.8
Smn1P97801 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.04□□□□□ -0.8
Smn1P97801 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Smn1P97801 Gm11439-201ENSMUST00000118598 409 ntBASIC10.04□□□□□ -0.8
Smn1P97801 Gm14832-201ENSMUST00000121289 322 ntBASIC10.04□□□□□ -0.8
Smn1P97801 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC10.04□□□□□ -0.8
Smn1P97801 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.04□□□□□ -0.8
Smn1P97801 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.04□□□□□ -0.8
Smn1P97801 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10.04□□□□□ -0.8
Smn1P97801 Gm42627-201ENSMUST00000197347 224 ntBASIC10.04□□□□□ -0.8
Smn1P97801 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
Smn1P97801 Gm7653-201ENSMUST00000214567 508 ntBASIC10.04□□□□□ -0.8
Smn1P97801 Gm19994-201ENSMUST00000217086 586 ntBASIC10.04□□□□□ -0.8
Smn1P97801 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.04□□□□□ -0.8
Smn1P97801 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Smn1P97801 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Smn1P97801 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.04□□□□□ -0.8
Smn1P97801 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Smn1P97801 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.04□□□□□ -0.8
Smn1P97801 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.04□□□□□ -0.8
Smn1P97801 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smn1P97801 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.03□□□□□ -0.8
Smn1P97801 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Smn1P97801 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms