Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.15□□□□□ -0.62
Nkx3-2P97503 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Gm23699-201ENSMUST00000158835 135 ntBASIC11.15□□□□□ -0.62
Nkx3-2P97503 Gm5523-201ENSMUST00000180415 997 ntBASIC11.15□□□□□ -0.62
Nkx3-2P97503 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.15□□□□□ -0.62
Nkx3-2P97503 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.15□□□□□ -0.62
Nkx3-2P97503 Gm18893-201ENSMUST00000198416 943 ntBASIC11.15□□□□□ -0.62
Nkx3-2P97503 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.15□□□□□ -0.62
Nkx3-2P97503 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC11.15□□□□□ -0.62
Nkx3-2P97503 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx3-2P97503 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.15□□□□□ -0.62
Nkx3-2P97503 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx3-2P97503 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nkx3-2P97503 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nkx3-2P97503 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Nkx3-2P97503 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nkx3-2P97503 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.15□□□□□ -0.63
Nkx3-2P97503 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nkx3-2P97503 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.14□□□□□ -0.63
Nkx3-2P97503 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Gm12165-201ENSMUST00000117047 342 ntBASIC11.14□□□□□ -0.63
Nkx3-2P97503 Gm13611-201ENSMUST00000118269 318 ntBASIC11.14□□□□□ -0.63
Nkx3-2P97503 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.14□□□□□ -0.63
Nkx3-2P97503 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Nkx3-2P97503 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.14□□□□□ -0.63
Nkx3-2P97503 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Gm27390-201ENSMUST00000184516 176 ntBASIC11.14□□□□□ -0.63
Nkx3-2P97503 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.14□□□□□ -0.63
Nkx3-2P97503 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.14□□□□□ -0.63
Nkx3-2P97503 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Ntng1-201ENSMUST00000051253 327 ntBASIC11.14□□□□□ -0.63
Nkx3-2P97503 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.14□□□□□ -0.63
Nkx3-2P97503 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx3-2P97503 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms