Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
Msx3P70354 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Msx3P70354 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.07□□□□□ -0.48
Msx3P70354 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Msx3P70354 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.07□□□□□ -0.48
Msx3P70354 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Gm13996-201ENSMUST00000118456 430 ntBASIC12.07□□□□□ -0.48
Msx3P70354 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Msx3P70354 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.07□□□□□ -0.48
Msx3P70354 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Msx3P70354 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.07□□□□□ -0.48
Msx3P70354 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.07□□□□□ -0.48
Msx3P70354 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.07□□□□□ -0.48
Msx3P70354 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Msx3P70354 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Msx3P70354 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.07□□□□□ -0.48
Msx3P70354 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx3P70354 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msx3P70354 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.06□□□□□ -0.48
Msx3P70354 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msx3P70354 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msx3P70354 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.06□□□□□ -0.48
Msx3P70354 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msx3P70354 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Msx3P70354 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msx3P70354 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msx3P70354 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Msx3P70354 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Msx3P70354 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.06□□□□□ -0.48
Msx3P70354 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.06□□□□□ -0.48
Msx3P70354 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msx3P70354 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.06□□□□□ -0.48
Msx3P70354 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msx3P70354 Gm11439-201ENSMUST00000118598 409 ntBASIC12.06□□□□□ -0.48
Msx3P70354 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.06□□□□□ -0.48
Msx3P70354 Gm26047-201ENSMUST00000157308 113 ntBASIC12.06□□□□□ -0.48
Msx3P70354 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.06□□□□□ -0.48
Msx3P70354 Gm26047-202ENSMUST00000198840 115 ntBASIC12.06□□□□□ -0.48
Msx3P70354 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.06□□□□□ -0.48
Msx3P70354 Gm8913-201ENSMUST00000209491 641 ntBASIC12.06□□□□□ -0.48
Msx3P70354 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.06□□□□□ -0.48
Msx3P70354 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msx3P70354 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msx3P70354 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Msx3P70354 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Msx3P70354 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msx3P70354 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msx3P70354 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Msx3P70354 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msx3P70354 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.06□□□□□ -0.48
Msx3P70354 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msx3P70354 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msx3P70354 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msx3P70354 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msx3P70354 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msx3P70354 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Msx3P70354 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.06□□□□□ -0.48
Msx3P70354 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msx3P70354 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msx3P70354 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msx3P70354 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.05□□□□□ -0.48
Msx3P70354 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msx3P70354 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msx3P70354 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Msx3P70354 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msx3P70354 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.05□□□□□ -0.48
Msx3P70354 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Msx3P70354 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms