Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm37318-201ENSMUST00000194325 695 ntBASIC12.05□□□□□ -0.48
Ybx1P62960 Gm38017-201ENSMUST00000194768 695 ntBASIC12.05□□□□□ -0.48
Ybx1P62960 Gm37287-201ENSMUST00000195449 695 ntBASIC12.05□□□□□ -0.48
Ybx1P62960 Gm37793-201ENSMUST00000195548 695 ntBASIC12.05□□□□□ -0.48
Ybx1P62960 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ybx1P62960 Gm43852-201ENSMUST00000202098 917 ntBASIC12.05□□□□□ -0.48
Ybx1P62960 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ybx1P62960 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.05□□□□□ -0.48
Ybx1P62960 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ybx1P62960 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ybx1P62960 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ybx1P62960 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.05□□□□□ -0.48
Ybx1P62960 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ybx1P62960 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ybx1P62960 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.05□□□□□ -0.48
Ybx1P62960 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ybx1P62960 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ybx1P62960 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ybx1P62960 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ybx1P62960 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ybx1P62960 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ybx1P62960 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.04□□□□□ -0.48
Ybx1P62960 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ybx1P62960 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ybx1P62960 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ybx1P62960 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ybx1P62960 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.04□□□□□ -0.48
Ybx1P62960 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.04□□□□□ -0.48
Ybx1P62960 Gm9192-201ENSMUST00000183221 985 ntBASIC12.04□□□□□ -0.48
Ybx1P62960 Gm29410-201ENSMUST00000188383 694 ntBASIC12.04□□□□□ -0.48
Ybx1P62960 Gm37981-201ENSMUST00000194280 535 ntBASIC12.04□□□□□ -0.48
Ybx1P62960 Gm44315-201ENSMUST00000203041 219 ntBASIC12.04□□□□□ -0.48
Ybx1P62960 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.04□□□□□ -0.48
Ybx1P62960 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ybx1P62960 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Ybx1P62960 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.04□□□□□ -0.48
Ybx1P62960 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.04□□□□□ -0.48
Ybx1P62960 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.04□□□□□ -0.48
Ybx1P62960 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ybx1P62960 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ybx1P62960 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ybx1P62960 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Ybx1P62960 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.04□□□□□ -0.48
Ybx1P62960 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ybx1P62960 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ybx1P62960 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ybx1P62960 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ybx1P62960 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ybx1P62960 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ybx1P62960 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ybx1P62960 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ybx1P62960 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ybx1P62960 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ybx1P62960 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Ybx1P62960 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ybx1P62960 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ybx1P62960 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ybx1P62960 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ybx1P62960 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ybx1P62960 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ybx1P62960 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ybx1P62960 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ybx1P62960 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ybx1P62960 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ybx1P62960 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Ybx1P62960 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ybx1P62960 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ybx1P62960 Gm23272-201ENSMUST00000104053 129 ntBASIC12.03□□□□□ -0.48
Ybx1P62960 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ybx1P62960 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ybx1P62960 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.03□□□□□ -0.48
Ybx1P62960 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.03□□□□□ -0.48
Ybx1P62960 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ybx1P62960 Gm25951-201ENSMUST00000175330 64 ntBASIC12.03□□□□□ -0.48
Ybx1P62960 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.03□□□□□ -0.48
Ybx1P62960 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.03□□□□□ -0.48
Ybx1P62960 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.03□□□□□ -0.48
Ybx1P62960 Gm9139-201ENSMUST00000218817 700 ntBASIC12.03□□□□□ -0.48
Ybx1P62960 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ybx1P62960 Gm25007-201ENSMUST00000083808 133 ntBASIC12.03□□□□□ -0.48
Ybx1P62960 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ybx1P62960 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.03□□□□□ -0.48
Ybx1P62960 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.03□□□□□ -0.48
Ybx1P62960 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ybx1P62960 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ybx1P62960 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ybx1P62960 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ybx1P62960 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ybx1P62960 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ybx1P62960 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ybx1P62960 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ybx1P62960 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ybx1P62960 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.02□□□□□ -0.48
Ybx1P62960 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ybx1P62960 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ybx1P62960 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ybx1P62960 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ybx1P62960 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ybx1P62960 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ybx1P62960 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms