Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39P62892 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39P62892 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39P62892 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Rpl39P62892 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39P62892 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39P62892 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39P62892 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Rpl39P62892 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39P62892 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39P62892 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC8.35□□□□□ -1.07
Rpl39P62892 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39P62892 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39P62892 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39P62892 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39P62892 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rpl39P62892 Gm44415-201ENSMUST00000204151 2112 ntBASIC8.35□□□□□ -1.07
Rpl39P62892 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC8.35□□□□□ -1.07
Rpl39P62892 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC8.35□□□□□ -1.07
Rpl39P62892 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Rpl39P62892 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Rpl39P62892 Gm10548-201ENSMUST00000097631 2629 ntBASIC8.34□□□□□ -1.07
Rpl39P62892 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Rpl39P62892 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Rpl39P62892 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Rpl39P62892 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC8.34□□□□□ -1.07
Rpl39P62892 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Rpl39P62892 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
Rpl39P62892 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC8.34□□□□□ -1.07
Rpl39P62892 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Rpl39P62892 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Gm4984-201ENSMUST00000115987 360 ntBASIC8.34□□□□□ -1.07
Rpl39P62892 Gm12960-201ENSMUST00000120017 1066 ntBASIC8.34□□□□□ -1.07
Rpl39P62892 Gm13570-201ENSMUST00000140763 309 ntBASIC8.34□□□□□ -1.07
Rpl39P62892 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC8.34□□□□□ -1.07
Rpl39P62892 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Gm27847-201ENSMUST00000183711 107 ntBASIC8.34□□□□□ -1.07
Rpl39P62892 Gm27375-201ENSMUST00000183799 107 ntBASIC8.34□□□□□ -1.07
Rpl39P62892 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
Rpl39P62892 Gm37201-201ENSMUST00000191845 523 ntBASIC8.34□□□□□ -1.07
Rpl39P62892 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
Rpl39P62892 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Tyms-ps-201ENSMUST00000219550 915 ntBASIC8.34□□□□□ -1.07
Rpl39P62892 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Gm10254-201ENSMUST00000052888 867 ntBASIC8.34□□□□□ -1.07
Rpl39P62892 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC8.34□□□□□ -1.07
Rpl39P62892 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 AC154404.1-201ENSMUST00000223601 2077 ntBASIC8.34□□□□□ -1.07
Rpl39P62892 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC8.34□□□□□ -1.07
Rpl39P62892 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
Rpl39P62892 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Rpl39P62892 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rpl39P62892 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC8.34□□□□□ -1.07
Rpl39P62892 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Rpl39P62892 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Rpl39P62892 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.08
Rpl39P62892 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Rpl39P62892 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl39P62892 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl39P62892 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Rpl39P62892 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Rpl39P62892 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl39P62892 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl39P62892 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl39P62892 Gm8706-201ENSMUST00000197372 1491 ntBASIC8.33□□□□□ -1.08
Rpl39P62892 Zscan30-202ENSMUST00000224144 1458 ntBASIC8.33□□□□□ -1.08
Rpl39P62892 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl39P62892 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rpl39P62892 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms