Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lsm3P62311 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lsm3P62311 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lsm3P62311 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Lsm3P62311 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lsm3P62311 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC10.65□□□□□ -0.7
Lsm3P62311 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lsm3P62311 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lsm3P62311 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Lsm3P62311 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.65□□□□□ -0.7
Lsm3P62311 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Lsm3P62311 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.65□□□□□ -0.71
Lsm3P62311 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.65□□□□□ -0.71
Lsm3P62311 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Lsm3P62311 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Lsm3P62311 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Lsm3P62311 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Lsm3P62311 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Lsm3P62311 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Lsm3P62311 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Lsm3P62311 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Lsm3P62311 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC10.64□□□□□ -0.71
Lsm3P62311 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC10.64□□□□□ -0.71
Lsm3P62311 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Lsm3P62311 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Lsm3P62311 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.64□□□□□ -0.71
Lsm3P62311 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Lsm3P62311 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Lsm3P62311 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.64□□□□□ -0.71
Lsm3P62311 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Lsm3P62311 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Lsm3P62311 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Lsm3P62311 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Lsm3P62311 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.64□□□□□ -0.71
Lsm3P62311 Gm13369-201ENSMUST00000119442 987 ntBASIC10.64□□□□□ -0.71
Lsm3P62311 Gm15321-201ENSMUST00000121290 288 ntBASIC10.64□□□□□ -0.71
Lsm3P62311 Gm12363-201ENSMUST00000122250 668 ntBASIC10.64□□□□□ -0.71
Lsm3P62311 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.64□□□□□ -0.71
Lsm3P62311 Gm2231-201ENSMUST00000125661 612 ntBASIC10.64□□□□□ -0.71
Lsm3P62311 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
Lsm3P62311 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Lsm3P62311 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.64□□□□□ -0.71
Lsm3P62311 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Lsm3P62311 AC132863.2-201ENSMUST00000226643 799 ntBASIC10.64□□□□□ -0.71
Lsm3P62311 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Lsm3P62311 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Lsm3P62311 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.64□□□□□ -0.71
Lsm3P62311 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Lsm3P62311 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Lsm3P62311 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Lsm3P62311 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Lsm3P62311 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Lsm3P62311 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.64□□□□□ -0.71
Lsm3P62311 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Lsm3P62311 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.64□□□□□ -0.71
Lsm3P62311 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.64□□□□□ -0.71
Lsm3P62311 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Lsm3P62311 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Lsm3P62311 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Lsm3P62311 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Lsm3P62311 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Lsm3P62311 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Lsm3P62311 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.64□□□□□ -0.71
Lsm3P62311 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Lsm3P62311 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Lsm3P62311 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Lsm3P62311 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.63□□□□□ -0.71
Lsm3P62311 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
Lsm3P62311 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Lsm3P62311 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Lsm3P62311 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Lsm3P62311 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Lsm3P62311 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Lsm3P62311 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.63□□□□□ -0.71
Lsm3P62311 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Lsm3P62311 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.63□□□□□ -0.71
Lsm3P62311 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.63□□□□□ -0.71
Lsm3P62311 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Lsm3P62311 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Lsm3P62311 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Lsm3P62311 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC10.63□□□□□ -0.71
Lsm3P62311 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Lsm3P62311 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Lsm3P62311 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Lsm3P62311 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Lsm3P62311 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Lsm3P62311 Gm12799-201ENSMUST00000118151 2560 ntBASIC10.63□□□□□ -0.71
Lsm3P62311 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Lsm3P62311 Gm23912-201ENSMUST00000104687 87 ntBASIC10.63□□□□□ -0.71
Lsm3P62311 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Lsm3P62311 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Lsm3P62311 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Lsm3P62311 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.63□□□□□ -0.71
Lsm3P62311 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC10.63□□□□□ -0.71
Lsm3P62311 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.63□□□□□ -0.71
Lsm3P62311 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.63□□□□□ -0.71
Lsm3P62311 Gm7446-201ENSMUST00000221035 1240 ntBASIC10.63□□□□□ -0.71
Lsm3P62311 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Lsm3P62311 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Lsm3P62311 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms