Protein–RNA interactions for Protein: P58269

Dpf3, Zinc finger protein DPF3, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dpf3P58269 Gm24370-201ENSMUST00000178007 102 ntBASIC12.66□□□□□ -0.38
Dpf3P58269 Gm23049-201ENSMUST00000178068 102 ntBASIC12.66□□□□□ -0.38
Dpf3P58269 Gm28019-201ENSMUST00000178138 101 ntBASIC12.66□□□□□ -0.38
Dpf3P58269 Gm25571-201ENSMUST00000178322 102 ntBASIC12.66□□□□□ -0.38
Dpf3P58269 Gm25355-201ENSMUST00000178456 101 ntBASIC12.66□□□□□ -0.38
Dpf3P58269 Gm24975-201ENSMUST00000178492 101 ntBASIC12.66□□□□□ -0.38
Dpf3P58269 Gm23189-201ENSMUST00000178954 102 ntBASIC12.66□□□□□ -0.38
Dpf3P58269 Gm25100-201ENSMUST00000179750 101 ntBASIC12.66□□□□□ -0.38
Dpf3P58269 Gm23064-201ENSMUST00000179866 101 ntBASIC12.66□□□□□ -0.38
Dpf3P58269 Gm7069-201ENSMUST00000182418 1008 ntBASIC12.66□□□□□ -0.38
Dpf3P58269 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Dpf3P58269 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.66□□□□□ -0.38
Dpf3P58269 Gm8342-201ENSMUST00000209839 757 ntBASIC12.66□□□□□ -0.38
Dpf3P58269 AC105408.1-201ENSMUST00000227771 802 ntBASIC12.66□□□□□ -0.38
Dpf3P58269 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Dpf3P58269 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Dpf3P58269 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Dpf3P58269 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Dpf3P58269 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Dpf3P58269 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Dpf3P58269 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Dpf3P58269 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Dpf3P58269 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Dpf3P58269 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Dpf3P58269 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Dpf3P58269 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.66□□□□□ -0.38
Dpf3P58269 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.66□□□□□ -0.38
Dpf3P58269 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Dpf3P58269 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Dpf3P58269 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Dpf3P58269 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.66□□□□□ -0.38
Dpf3P58269 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.65□□□□□ -0.38
Dpf3P58269 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dpf3P58269 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dpf3P58269 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Dpf3P58269 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.65□□□□□ -0.38
Dpf3P58269 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dpf3P58269 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.65□□□□□ -0.38
Dpf3P58269 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dpf3P58269 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dpf3P58269 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dpf3P58269 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Dpf3P58269 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dpf3P58269 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.65□□□□□ -0.38
Dpf3P58269 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dpf3P58269 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Dpf3P58269 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dpf3P58269 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dpf3P58269 Gm13700-201ENSMUST00000118624 1128 ntBASIC12.65□□□□□ -0.38
Dpf3P58269 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Dpf3P58269 Gm9166-201ENSMUST00000120293 561 ntBASIC12.65□□□□□ -0.38
Dpf3P58269 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.65□□□□□ -0.38
Dpf3P58269 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Dpf3P58269 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Dpf3P58269 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dpf3P58269 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.65□□□□□ -0.38
Dpf3P58269 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dpf3P58269 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Dpf3P58269 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dpf3P58269 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dpf3P58269 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Dpf3P58269 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Dpf3P58269 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dpf3P58269 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Dpf3P58269 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dpf3P58269 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dpf3P58269 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Dpf3P58269 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dpf3P58269 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dpf3P58269 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Dpf3P58269 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dpf3P58269 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Dpf3P58269 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
Dpf3P58269 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Dpf3P58269 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Dpf3P58269 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dpf3P58269 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Dpf3P58269 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Dpf3P58269 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dpf3P58269 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dpf3P58269 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Dpf3P58269 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dpf3P58269 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dpf3P58269 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dpf3P58269 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dpf3P58269 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dpf3P58269 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.64□□□□□ -0.39
Dpf3P58269 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dpf3P58269 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.64□□□□□ -0.39
Dpf3P58269 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Dpf3P58269 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dpf3P58269 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Dpf3P58269 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Dpf3P58269 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dpf3P58269 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.64□□□□□ -0.39
Dpf3P58269 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.64□□□□□ -0.39
Dpf3P58269 Gm11957-201ENSMUST00000118304 779 ntBASIC12.64□□□□□ -0.39
Dpf3P58269 Gng5-ps-201ENSMUST00000120931 205 ntBASIC12.64□□□□□ -0.39
Dpf3P58269 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
Dpf3P58269 Gm12906-201ENSMUST00000154610 441 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms