Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.22□□□□□ -0.61
Cdkn2bP55271 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Gm3096-201ENSMUST00000185770 364 ntBASIC11.22□□□□□ -0.61
Cdkn2bP55271 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.22□□□□□ -0.61
Cdkn2bP55271 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Olfr284-202ENSMUST00000206647 966 ntBASIC11.22□□□□□ -0.61
Cdkn2bP55271 Gm45880-201ENSMUST00000213041 853 ntBASIC11.22□□□□□ -0.61
Cdkn2bP55271 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.22□□□□□ -0.61
Cdkn2bP55271 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.22□□□□□ -0.61
Cdkn2bP55271 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Gm9823-201ENSMUST00000051212 327 ntBASIC11.22□□□□□ -0.61
Cdkn2bP55271 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdkn2bP55271 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.21□□□□□ -0.61
Cdkn2bP55271 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Gm15370-201ENSMUST00000117158 253 ntBASIC11.21□□□□□ -0.61
Cdkn2bP55271 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Gm5070-201ENSMUST00000177599 862 ntBASIC11.21□□□□□ -0.61
Cdkn2bP55271 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Gm10608-202ENSMUST00000213924 676 ntBASIC11.21□□□□□ -0.61
Cdkn2bP55271 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdkn2bP55271 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.21□□□□□ -0.62
Cdkn2bP55271 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdkn2bP55271 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdkn2bP55271 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.62
Cdkn2bP55271 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cdkn2bP55271 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.62
Cdkn2bP55271 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdkn2bP55271 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdkn2bP55271 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdkn2bP55271 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Cdkn2bP55271 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdkn2bP55271 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.21□□□□□ -0.62
Cdkn2bP55271 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.21□□□□□ -0.62
Cdkn2bP55271 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.21□□□□□ -0.62
Cdkn2bP55271 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdkn2bP55271 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Cdkn2bP55271 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdkn2bP55271 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.21□□□□□ -0.62
Cdkn2bP55271 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdkn2bP55271 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cdkn2bP55271 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdkn2bP55271 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms