Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.53□□□□□ -0.4
NrlP54846 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NrlP54846 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.53□□□□□ -0.4
NrlP54846 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NrlP54846 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.53□□□□□ -0.4
NrlP54846 Gm17877-201ENSMUST00000192578 814 ntBASIC12.53□□□□□ -0.4
NrlP54846 Gm3793-201ENSMUST00000204973 672 ntBASIC12.53□□□□□ -0.4
NrlP54846 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.53□□□□□ -0.4
NrlP54846 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.53□□□□□ -0.4
NrlP54846 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.53□□□□□ -0.4
NrlP54846 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NrlP54846 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NrlP54846 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NrlP54846 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.53□□□□□ -0.4
NrlP54846 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
NrlP54846 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.53□□□□□ -0.4
NrlP54846 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NrlP54846 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NrlP54846 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NrlP54846 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NrlP54846 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.53□□□□□ -0.4
NrlP54846 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NrlP54846 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NrlP54846 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
NrlP54846 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
NrlP54846 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NrlP54846 Map1b-203ENSMUST00000223725 2669 ntBASIC12.53□□□□□ -0.4
NrlP54846 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NrlP54846 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.52□□□□□ -0.4
NrlP54846 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
NrlP54846 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NrlP54846 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NrlP54846 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NrlP54846 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.52□□□□□ -0.4
NrlP54846 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
NrlP54846 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NrlP54846 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NrlP54846 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NrlP54846 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.52□□□□□ -0.41
NrlP54846 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.52□□□□□ -0.41
NrlP54846 Gm18367-201ENSMUST00000176139 600 ntBASIC12.52□□□□□ -0.41
NrlP54846 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.52□□□□□ -0.41
NrlP54846 Gm12407-201ENSMUST00000180219 324 ntBASIC12.52□□□□□ -0.41
NrlP54846 Gm28388-201ENSMUST00000186262 437 ntBASIC12.52□□□□□ -0.41
NrlP54846 Gm42657-201ENSMUST00000201746 211 ntBASIC12.52□□□□□ -0.41
NrlP54846 Gm43852-201ENSMUST00000202098 917 ntBASIC12.52□□□□□ -0.41
NrlP54846 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
NrlP54846 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.52□□□□□ -0.41
NrlP54846 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NrlP54846 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.52□□□□□ -0.41
NrlP54846 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NrlP54846 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
NrlP54846 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
NrlP54846 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.52□□□□□ -0.41
NrlP54846 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NrlP54846 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NrlP54846 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.52□□□□□ -0.41
NrlP54846 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
NrlP54846 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NrlP54846 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
NrlP54846 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NrlP54846 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
NrlP54846 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NrlP54846 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NrlP54846 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NrlP54846 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
NrlP54846 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NrlP54846 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NrlP54846 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NrlP54846 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
NrlP54846 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.51□□□□□ -0.41
NrlP54846 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
NrlP54846 Gm26013-201ENSMUST00000104404 119 ntBASIC12.51□□□□□ -0.41
NrlP54846 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NrlP54846 Gm11340-201ENSMUST00000119226 412 ntBASIC12.51□□□□□ -0.41
NrlP54846 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.51□□□□□ -0.41
NrlP54846 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
NrlP54846 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.51□□□□□ -0.41
NrlP54846 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.51□□□□□ -0.41
NrlP54846 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.51□□□□□ -0.41
NrlP54846 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NrlP54846 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.51□□□□□ -0.41
NrlP54846 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.51□□□□□ -0.41
NrlP54846 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.51□□□□□ -0.41
NrlP54846 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.51□□□□□ -0.41
NrlP54846 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC12.51□□□□□ -0.41
NrlP54846 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.51□□□□□ -0.41
NrlP54846 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NrlP54846 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NrlP54846 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
NrlP54846 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NrlP54846 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NrlP54846 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
NrlP54846 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NrlP54846 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NrlP54846 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NrlP54846 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
NrlP54846 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NrlP54846 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NrlP54846 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms