Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox1P53783 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox1P53783 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Sox1P53783 Gm14005-210ENSMUST00000225087 1413 ntBASIC12.03□□□□□ -0.48
Sox1P53783 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox1P53783 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Sox1P53783 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox1P53783 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox1P53783 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox1P53783 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox1P53783 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.03□□□□□ -0.48
Sox1P53783 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox1P53783 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox1P53783 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox1P53783 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox1P53783 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox1P53783 Gm6755-201ENSMUST00000100598 864 ntBASIC12.03□□□□□ -0.48
Sox1P53783 Gm6740-201ENSMUST00000100617 864 ntBASIC12.03□□□□□ -0.48
Sox1P53783 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Sox1P53783 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox1P53783 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.03□□□□□ -0.48
Sox1P53783 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox1P53783 Gm4943-201ENSMUST00000132879 424 ntBASIC12.03□□□□□ -0.48
Sox1P53783 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Sox1P53783 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC12.03□□□□□ -0.48
Sox1P53783 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.03□□□□□ -0.48
Sox1P53783 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.03□□□□□ -0.48
Sox1P53783 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC12.03□□□□□ -0.48
Sox1P53783 Gm2553-201ENSMUST00000215986 605 ntBASIC12.03□□□□□ -0.48
Sox1P53783 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC12.03□□□□□ -0.48
Sox1P53783 Gm7525-201ENSMUST00000219425 454 ntBASIC12.03□□□□□ -0.48
Sox1P53783 Gm18515-201ENSMUST00000219755 797 ntBASIC12.03□□□□□ -0.48
Sox1P53783 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC12.03□□□□□ -0.48
Sox1P53783 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sox1P53783 AC154305.2-201ENSMUST00000225813 901 ntBASIC12.03□□□□□ -0.48
Sox1P53783 AC121567.1-201ENSMUST00000227213 842 ntBASIC12.03□□□□□ -0.48
Sox1P53783 AC154213.1-201ENSMUST00000228234 583 ntBASIC12.03□□□□□ -0.48
Sox1P53783 AC125117.2-201ENSMUST00000228344 1140 ntBASIC12.03□□□□□ -0.48
Sox1P53783 Gm15519-201ENSMUST00000120088 1566 ntBASIC12.03□□□□□ -0.48
Sox1P53783 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox1P53783 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox1P53783 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox1P53783 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox1P53783 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sox1P53783 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox1P53783 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox1P53783 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox1P53783 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox1P53783 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Sox1P53783 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox1P53783 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox1P53783 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Sox1P53783 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Sox1P53783 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox1P53783 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Sox1P53783 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.03□□□□□ -0.48
Sox1P53783 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox1P53783 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox1P53783 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox1P53783 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox1P53783 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox1P53783 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.02□□□□□ -0.48
Sox1P53783 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox1P53783 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox1P53783 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.02□□□□□ -0.48
Sox1P53783 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox1P53783 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
Sox1P53783 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox1P53783 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC12.02□□□□□ -0.49
Sox1P53783 Gm13422-201ENSMUST00000118834 504 ntBASIC12.02□□□□□ -0.49
Sox1P53783 Gm8152-201ENSMUST00000120842 637 ntBASIC12.02□□□□□ -0.49
Sox1P53783 Gm14165-201ENSMUST00000121456 952 ntBASIC12.02□□□□□ -0.49
Sox1P53783 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sox1P53783 Gm25492-201ENSMUST00000157383 129 ntBASIC12.02□□□□□ -0.49
Sox1P53783 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox1P53783 Gm7504-201ENSMUST00000201449 424 ntBASIC12.02□□□□□ -0.49
Sox1P53783 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sox1P53783 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC12.02□□□□□ -0.49
Sox1P53783 CT009764.1-201ENSMUST00000222260 483 ntBASIC12.02□□□□□ -0.49
Sox1P53783 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox1P53783 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Sox1P53783 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Sox1P53783 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox1P53783 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.02□□□□□ -0.49
Sox1P53783 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox1P53783 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.02□□□□□ -0.49
Sox1P53783 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sox1P53783 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sox1P53783 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox1P53783 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox1P53783 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Sox1P53783 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox1P53783 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox1P53783 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox1P53783 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox1P53783 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox1P53783 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC12.02□□□□□ -0.49
Sox1P53783 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sox1P53783 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.02□□□□□ -0.49
Sox1P53783 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms