Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atoh1P48985 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Atoh1P48985 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Atoh1P48985 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atoh1P48985 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Atoh1P48985 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Atoh1P48985 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atoh1P48985 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atoh1P48985 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
Atoh1P48985 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atoh1P48985 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atoh1P48985 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Atoh1P48985 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Atoh1P48985 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Atoh1P48985 Gm13347-201ENSMUST00000120298 1353 ntBASIC13.24□□□□□ -0.29
Atoh1P48985 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.24□□□□□ -0.29
Atoh1P48985 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atoh1P48985 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atoh1P48985 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atoh1P48985 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atoh1P48985 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atoh1P48985 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Atoh1P48985 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Atoh1P48985 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atoh1P48985 Gm14497-201ENSMUST00000119537 580 ntBASIC13.24□□□□□ -0.29
Atoh1P48985 Gm5555-201ENSMUST00000120352 1111 ntBASIC13.24□□□□□ -0.29
Atoh1P48985 Gm15197-201ENSMUST00000120526 478 ntBASIC13.24□□□□□ -0.29
Atoh1P48985 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Atoh1P48985 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atoh1P48985 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Atoh1P48985 Gm43969-201ENSMUST00000204833 535 ntBASIC13.24□□□□□ -0.29
Atoh1P48985 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC13.24□□□□□ -0.29
Atoh1P48985 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC13.24□□□□□ -0.29
Atoh1P48985 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Atoh1P48985 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atoh1P48985 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Atoh1P48985 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Atoh1P48985 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.24□□□□□ -0.29
Atoh1P48985 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.24□□□□□ -0.29
Atoh1P48985 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atoh1P48985 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC13.24□□□□□ -0.29
Atoh1P48985 Gm6831-202ENSMUST00000213025 1673 ntBASIC13.24□□□□□ -0.29
Atoh1P48985 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Atoh1P48985 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atoh1P48985 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atoh1P48985 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atoh1P48985 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atoh1P48985 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atoh1P48985 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atoh1P48985 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atoh1P48985 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atoh1P48985 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Atoh1P48985 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Atoh1P48985 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atoh1P48985 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atoh1P48985 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atoh1P48985 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Atoh1P48985 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Atoh1P48985 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.23□□□□□ -0.29
Atoh1P48985 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atoh1P48985 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atoh1P48985 Gm26368-201ENSMUST00000157826 118 ntBASIC13.23□□□□□ -0.29
Atoh1P48985 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Atoh1P48985 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Atoh1P48985 Gm34379-201ENSMUST00000195036 290 ntBASIC13.23□□□□□ -0.29
Atoh1P48985 Gm45085-201ENSMUST00000209100 441 ntBASIC13.23□□□□□ -0.29
Atoh1P48985 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC13.23□□□□□ -0.29
Atoh1P48985 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC13.23□□□□□ -0.29
Atoh1P48985 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC13.23□□□□□ -0.29
Atoh1P48985 AC142266.1-201ENSMUST00000228107 415 ntBASIC13.23□□□□□ -0.29
Atoh1P48985 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atoh1P48985 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atoh1P48985 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Atoh1P48985 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atoh1P48985 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.23□□□□□ -0.29
Atoh1P48985 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atoh1P48985 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.23□□□□□ -0.29
Atoh1P48985 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Atoh1P48985 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atoh1P48985 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.23□□□□□ -0.29
Atoh1P48985 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Atoh1P48985 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Atoh1P48985 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
Atoh1P48985 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atoh1P48985 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atoh1P48985 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC13.22□□□□□ -0.29
Atoh1P48985 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Atoh1P48985 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Atoh1P48985 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Atoh1P48985 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atoh1P48985 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Atoh1P48985 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atoh1P48985 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Atoh1P48985 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atoh1P48985 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atoh1P48985 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Atoh1P48985 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Atoh1P48985 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atoh1P48985 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atoh1P48985 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms