Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Rfx3P48381 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.62□□□□□ -0.71
Rfx3P48381 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Rfx3P48381 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
Rfx3P48381 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.62□□□□□ -0.71
Rfx3P48381 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.62□□□□□ -0.71
Rfx3P48381 Gm14247-201ENSMUST00000120950 237 ntBASIC10.62□□□□□ -0.71
Rfx3P48381 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.62□□□□□ -0.71
Rfx3P48381 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.62□□□□□ -0.71
Rfx3P48381 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.62□□□□□ -0.71
Rfx3P48381 Gm5706-201ENSMUST00000181525 993 ntBASIC10.62□□□□□ -0.71
Rfx3P48381 Gm6621-201ENSMUST00000193251 772 ntBASIC10.62□□□□□ -0.71
Rfx3P48381 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Gm19994-201ENSMUST00000217086 586 ntBASIC10.62□□□□□ -0.71
Rfx3P48381 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.62□□□□□ -0.71
Rfx3P48381 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Rfx3P48381 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.62□□□□□ -0.71
Rfx3P48381 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.62□□□□□ -0.71
Rfx3P48381 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.62□□□□□ -0.71
Rfx3P48381 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
Rfx3P48381 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rfx3P48381 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.62□□□□□ -0.71
Rfx3P48381 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.61□□□□□ -0.71
Rfx3P48381 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Rfx3P48381 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.61□□□□□ -0.71
Rfx3P48381 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.61□□□□□ -0.71
Rfx3P48381 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.61□□□□□ -0.71
Rfx3P48381 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.61□□□□□ -0.71
Rfx3P48381 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Btrc-209ENSMUST00000224478 2194 ntBASIC10.61□□□□□ -0.71
Rfx3P48381 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.61□□□□□ -0.71
Rfx3P48381 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Gm23270-201ENSMUST00000104055 131 ntBASIC10.61□□□□□ -0.71
Rfx3P48381 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Rfx3P48381 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Gm11930-201ENSMUST00000117788 190 ntBASIC10.61□□□□□ -0.71
Rfx3P48381 Gm11439-201ENSMUST00000118598 409 ntBASIC10.61□□□□□ -0.71
Rfx3P48381 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.61□□□□□ -0.71
Rfx3P48381 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Rfx3P48381 Gm27516-201ENSMUST00000184237 98 ntBASIC10.61□□□□□ -0.71
Rfx3P48381 Gm9230-201ENSMUST00000188228 532 ntBASIC10.61□□□□□ -0.71
Rfx3P48381 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.61□□□□□ -0.71
Rfx3P48381 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.61□□□□□ -0.71
Rfx3P48381 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.61□□□□□ -0.71
Rfx3P48381 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Gm21769-201ENSMUST00000211922 111 ntBASIC10.61□□□□□ -0.71
Rfx3P48381 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Gm8420-201ENSMUST00000097103 598 ntBASIC10.61□□□□□ -0.71
Rfx3P48381 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Rfx3P48381 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC10.61□□□□□ -0.71
Rfx3P48381 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms