Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Mir8115-201ENSMUST00000184992 119 ntBASIC11.14□□□□□ -0.63
Nkx2-6P43688 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Gm35960-201ENSMUST00000202712 767 ntBASIC11.14□□□□□ -0.63
Nkx2-6P43688 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.14□□□□□ -0.63
Nkx2-6P43688 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.14□□□□□ -0.63
Nkx2-6P43688 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.14□□□□□ -0.63
Nkx2-6P43688 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.14□□□□□ -0.63
Nkx2-6P43688 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Nkx2-6P43688 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.14□□□□□ -0.63
Nkx2-6P43688 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Nkx2-6P43688 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.13□□□□□ -0.63
Nkx2-6P43688 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Gm12516-201ENSMUST00000120819 385 ntBASIC11.13□□□□□ -0.63
Nkx2-6P43688 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Gm24844-201ENSMUST00000158679 127 ntBASIC11.13□□□□□ -0.63
Nkx2-6P43688 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Gm37299-201ENSMUST00000193951 826 ntBASIC11.13□□□□□ -0.63
Nkx2-6P43688 Gm43186-201ENSMUST00000198130 824 ntBASIC11.13□□□□□ -0.63
Nkx2-6P43688 Gm6450-201ENSMUST00000200896 574 ntBASIC11.13□□□□□ -0.63
Nkx2-6P43688 Gm2517-201ENSMUST00000215651 348 ntBASIC11.13□□□□□ -0.63
Nkx2-6P43688 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.13□□□□□ -0.63
Nkx2-6P43688 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.13□□□□□ -0.63
Nkx2-6P43688 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.13□□□□□ -0.63
Nkx2-6P43688 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.13□□□□□ -0.63
Nkx2-6P43688 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-6P43688 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nkx2-6P43688 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-6P43688 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms