Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm5996-201ENSMUST00000211110 718 ntBASIC11.16□□□□□ -0.62
Cdx2P43241 AC168279.1-201ENSMUST00000214611 382 ntBASIC11.16□□□□□ -0.62
Cdx2P43241 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.16□□□□□ -0.62
Cdx2P43241 Gm18968-201ENSMUST00000221319 862 ntBASIC11.16□□□□□ -0.62
Cdx2P43241 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.16□□□□□ -0.62
Cdx2P43241 Gm5468-202ENSMUST00000227851 682 ntBASIC11.16□□□□□ -0.62
Cdx2P43241 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Cdx2P43241 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdx2P43241 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdx2P43241 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdx2P43241 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.16□□□□□ -0.62
Cdx2P43241 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdx2P43241 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Cdx2P43241 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdx2P43241 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Cdx2P43241 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdx2P43241 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cdx2P43241 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdx2P43241 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdx2P43241 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdx2P43241 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cdx2P43241 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.15□□□□□ -0.62
Cdx2P43241 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdx2P43241 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdx2P43241 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdx2P43241 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdx2P43241 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Cdx2P43241 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdx2P43241 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.15□□□□□ -0.62
Cdx2P43241 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.15□□□□□ -0.62
Cdx2P43241 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdx2P43241 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Cdx2P43241 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdx2P43241 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdx2P43241 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdx2P43241 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdx2P43241 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.15□□□□□ -0.62
Cdx2P43241 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdx2P43241 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdx2P43241 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.15□□□□□ -0.62
Cdx2P43241 Gm13422-201ENSMUST00000118834 504 ntBASIC11.15□□□□□ -0.62
Cdx2P43241 Gm12274-201ENSMUST00000120062 385 ntBASIC11.15□□□□□ -0.62
Cdx2P43241 Gm5257-201ENSMUST00000121823 790 ntBASIC11.15□□□□□ -0.62
Cdx2P43241 Gm22146-201ENSMUST00000157397 288 ntBASIC11.15□□□□□ -0.62
Cdx2P43241 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdx2P43241 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.15□□□□□ -0.62
Cdx2P43241 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.15□□□□□ -0.62
Cdx2P43241 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.15□□□□□ -0.62
Cdx2P43241 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.15□□□□□ -0.62
Cdx2P43241 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC11.15□□□□□ -0.62
Cdx2P43241 Gm43163-201ENSMUST00000196571 442 ntBASIC11.15□□□□□ -0.62
Cdx2P43241 Gm17825-201ENSMUST00000206836 794 ntBASIC11.15□□□□□ -0.62
Cdx2P43241 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdx2P43241 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.15□□□□□ -0.62
Cdx2P43241 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC11.15□□□□□ -0.62
Cdx2P43241 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdx2P43241 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.15□□□□□ -0.62
Cdx2P43241 AC154572.1-201ENSMUST00000226098 1204 ntBASIC11.15□□□□□ -0.62
Cdx2P43241 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdx2P43241 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Cdx2P43241 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.15□□□□□ -0.62
Cdx2P43241 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.15□□□□□ -0.62
Cdx2P43241 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Cdx2P43241 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdx2P43241 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdx2P43241 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdx2P43241 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Cdx2P43241 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdx2P43241 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.15□□□□□ -0.62
Cdx2P43241 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.15□□□□□ -0.62
Cdx2P43241 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdx2P43241 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdx2P43241 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Cdx2P43241 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cdx2P43241 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.15□□□□□ -0.63
Cdx2P43241 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.63
Cdx2P43241 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdx2P43241 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.14□□□□□ -0.63
Cdx2P43241 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdx2P43241 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdx2P43241 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cdx2P43241 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdx2P43241 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.14□□□□□ -0.63
Cdx2P43241 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Cdx2P43241 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdx2P43241 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdx2P43241 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
Cdx2P43241 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdx2P43241 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdx2P43241 Gm24791-201ENSMUST00000104284 131 ntBASIC11.14□□□□□ -0.63
Cdx2P43241 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdx2P43241 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdx2P43241 Gm14395-201ENSMUST00000120494 563 ntBASIC11.14□□□□□ -0.63
Cdx2P43241 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdx2P43241 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.14□□□□□ -0.63
Cdx2P43241 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC11.14□□□□□ -0.63
Cdx2P43241 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.14□□□□□ -0.63
Cdx2P43241 Gm26989-201ENSMUST00000182608 749 ntBASIC11.14□□□□□ -0.63
Cdx2P43241 Mir6923-201ENSMUST00000184592 72 ntBASIC11.14□□□□□ -0.63
Cdx2P43241 Gm37638-201ENSMUST00000194337 1123 ntBASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms