Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.03□□□□□ -0.48
Mmp13P33435 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp13P33435 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp13P33435 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.03□□□□□ -0.48
Mmp13P33435 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.03□□□□□ -0.48
Mmp13P33435 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Mmp13P33435 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Mmp13P33435 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp13P33435 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp13P33435 Gm8420-201ENSMUST00000097103 598 ntBASIC12.03□□□□□ -0.48
Mmp13P33435 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp13P33435 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.03□□□□□ -0.48
Mmp13P33435 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.03□□□□□ -0.48
Mmp13P33435 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp13P33435 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp13P33435 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.03□□□□□ -0.48
Mmp13P33435 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp13P33435 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp13P33435 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp13P33435 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp13P33435 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp13P33435 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.03□□□□□ -0.48
Mmp13P33435 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp13P33435 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.03□□□□□ -0.48
Mmp13P33435 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.03□□□□□ -0.48
Mmp13P33435 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.03□□□□□ -0.48
Mmp13P33435 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp13P33435 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.03□□□□□ -0.48
Mmp13P33435 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Mmp13P33435 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Mmp13P33435 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Mmp13P33435 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Mmp13P33435 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Mmp13P33435 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Mmp13P33435 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Mmp13P33435 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Mmp13P33435 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp13P33435 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp13P33435 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp13P33435 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp13P33435 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
Mmp13P33435 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.02□□□□□ -0.49
Mmp13P33435 Gm15236-201ENSMUST00000117309 379 ntBASIC12.02□□□□□ -0.49
Mmp13P33435 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp13P33435 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Mmp13P33435 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp13P33435 Gm8885-201ENSMUST00000189382 598 ntBASIC12.02□□□□□ -0.49
Mmp13P33435 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.02□□□□□ -0.49
Mmp13P33435 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.02□□□□□ -0.49
Mmp13P33435 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp13P33435 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.02□□□□□ -0.49
Mmp13P33435 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.02□□□□□ -0.49
Mmp13P33435 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp13P33435 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Mmp13P33435 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Mmp13P33435 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.02□□□□□ -0.49
Mmp13P33435 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp13P33435 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.02□□□□□ -0.49
Mmp13P33435 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Mmp13P33435 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp13P33435 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp13P33435 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.02□□□□□ -0.49
Mmp13P33435 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp13P33435 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp13P33435 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp13P33435 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp13P33435 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Mmp13P33435 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Mmp13P33435 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.02□□□□□ -0.49
Mmp13P33435 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.02□□□□□ -0.49
Mmp13P33435 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Mmp13P33435 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Mmp13P33435 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Mmp13P33435 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.01□□□□□ -0.49
Mmp13P33435 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Mmp13P33435 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Mmp13P33435 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.01□□□□□ -0.49
Mmp13P33435 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Mmp13P33435 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Mmp13P33435 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 Gm13296-201ENSMUST00000117854 997 ntBASIC12.01□□□□□ -0.49
Mmp13P33435 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.01□□□□□ -0.49
Mmp13P33435 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.01□□□□□ -0.49
Mmp13P33435 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.01□□□□□ -0.49
Mmp13P33435 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 Gm6963-201ENSMUST00000147879 379 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms