Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nedd8P29595 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nedd8P29595 Gm2231-201ENSMUST00000125661 612 ntBASIC10.8□□□□□ -0.68
Nedd8P29595 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.8□□□□□ -0.68
Nedd8P29595 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC10.8□□□□□ -0.68
Nedd8P29595 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nedd8P29595 Gm45195-201ENSMUST00000205597 1008 ntBASIC10.8□□□□□ -0.68
Nedd8P29595 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.8□□□□□ -0.68
Nedd8P29595 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.8□□□□□ -0.68
Nedd8P29595 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nedd8P29595 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nedd8P29595 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.8□□□□□ -0.68
Nedd8P29595 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Nedd8P29595 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nedd8P29595 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nedd8P29595 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nedd8P29595 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Nedd8P29595 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nedd8P29595 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.8□□□□□ -0.68
Nedd8P29595 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC10.8□□□□□ -0.68
Nedd8P29595 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nedd8P29595 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nedd8P29595 AC159621.2-201ENSMUST00000223519 1326 ntBASIC10.8□□□□□ -0.68
Nedd8P29595 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.8□□□□□ -0.68
Nedd8P29595 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nedd8P29595 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nedd8P29595 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nedd8P29595 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Nedd8P29595 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nedd8P29595 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Nedd8P29595 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nedd8P29595 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nedd8P29595 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nedd8P29595 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Nedd8P29595 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Nedd8P29595 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nedd8P29595 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nedd8P29595 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nedd8P29595 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nedd8P29595 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Nedd8P29595 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nedd8P29595 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Nedd8P29595 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Nedd8P29595 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Nedd8P29595 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nedd8P29595 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nedd8P29595 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nedd8P29595 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nedd8P29595 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Nedd8P29595 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nedd8P29595 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.79□□□□□ -0.68
Nedd8P29595 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nedd8P29595 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nedd8P29595 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Nedd8P29595 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.79□□□□□ -0.68
Nedd8P29595 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nedd8P29595 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Nedd8P29595 Gm24694-201ENSMUST00000180054 110 ntBASIC10.79□□□□□ -0.68
Nedd8P29595 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nedd8P29595 Gm27663-201ENSMUST00000184839 110 ntBASIC10.79□□□□□ -0.68
Nedd8P29595 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.79□□□□□ -0.68
Nedd8P29595 Gm19220-201ENSMUST00000222682 803 ntBASIC10.79□□□□□ -0.68
Nedd8P29595 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nedd8P29595 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nedd8P29595 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Nedd8P29595 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Nedd8P29595 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Nedd8P29595 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Nedd8P29595 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Nedd8P29595 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nedd8P29595 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nedd8P29595 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nedd8P29595 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nedd8P29595 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nedd8P29595 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nedd8P29595 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nedd8P29595 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nedd8P29595 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nedd8P29595 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.78□□□□□ -0.68
Nedd8P29595 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.78□□□□□ -0.68
Nedd8P29595 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Nedd8P29595 Gm13492-201ENSMUST00000119772 665 ntBASIC10.78□□□□□ -0.68
Nedd8P29595 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.78□□□□□ -0.68
Nedd8P29595 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms