Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6bP23440 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6bP23440 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6bP23440 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Pde6bP23440 Gm15004-201ENSMUST00000119192 630 ntBASIC12.9□□□□□ -0.34
Pde6bP23440 Gm14585-201ENSMUST00000120713 634 ntBASIC12.9□□□□□ -0.34
Pde6bP23440 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.9□□□□□ -0.34
Pde6bP23440 Gm8194-201ENSMUST00000159783 859 ntBASIC12.9□□□□□ -0.34
Pde6bP23440 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.9□□□□□ -0.34
Pde6bP23440 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6bP23440 Gm19287-201ENSMUST00000203190 358 ntBASIC12.9□□□□□ -0.34
Pde6bP23440 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
Pde6bP23440 Gm2553-201ENSMUST00000215986 605 ntBASIC12.9□□□□□ -0.34
Pde6bP23440 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.9□□□□□ -0.34
Pde6bP23440 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.9□□□□□ -0.34
Pde6bP23440 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6bP23440 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6bP23440 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6bP23440 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6bP23440 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6bP23440 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.9□□□□□ -0.34
Pde6bP23440 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6bP23440 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6bP23440 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pde6bP23440 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pde6bP23440 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pde6bP23440 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Pde6bP23440 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pde6bP23440 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.89□□□□□ -0.35
Pde6bP23440 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pde6bP23440 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pde6bP23440 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pde6bP23440 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pde6bP23440 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pde6bP23440 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pde6bP23440 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pde6bP23440 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.89□□□□□ -0.35
Pde6bP23440 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pde6bP23440 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pde6bP23440 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pde6bP23440 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.89□□□□□ -0.35
Pde6bP23440 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.89□□□□□ -0.35
Pde6bP23440 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pde6bP23440 Gm15610-201ENSMUST00000120584 195 ntBASIC12.89□□□□□ -0.35
Pde6bP23440 Gm15595-201ENSMUST00000120840 961 ntBASIC12.89□□□□□ -0.35
Pde6bP23440 Gm11246-201ENSMUST00000120880 345 ntBASIC12.89□□□□□ -0.35
Pde6bP23440 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pde6bP23440 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pde6bP23440 Gm9540-201ENSMUST00000188230 478 ntBASIC12.89□□□□□ -0.35
Pde6bP23440 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pde6bP23440 Gm7600-201ENSMUST00000209657 785 ntBASIC12.89□□□□□ -0.35
Pde6bP23440 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Pde6bP23440 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.89□□□□□ -0.35
Pde6bP23440 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pde6bP23440 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pde6bP23440 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pde6bP23440 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.89□□□□□ -0.35
Pde6bP23440 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Pde6bP23440 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pde6bP23440 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pde6bP23440 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pde6bP23440 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pde6bP23440 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pde6bP23440 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pde6bP23440 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pde6bP23440 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pde6bP23440 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.88□□□□□ -0.35
Pde6bP23440 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pde6bP23440 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pde6bP23440 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pde6bP23440 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pde6bP23440 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.88□□□□□ -0.35
Pde6bP23440 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.88□□□□□ -0.35
Pde6bP23440 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pde6bP23440 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pde6bP23440 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pde6bP23440 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pde6bP23440 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pde6bP23440 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pde6bP23440 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pde6bP23440 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.88□□□□□ -0.35
Pde6bP23440 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pde6bP23440 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Pde6bP23440 Gm13916-201ENSMUST00000117368 628 ntBASIC12.88□□□□□ -0.35
Pde6bP23440 Gm15207-201ENSMUST00000119259 442 ntBASIC12.88□□□□□ -0.35
Pde6bP23440 Gm8737-201ENSMUST00000122208 642 ntBASIC12.88□□□□□ -0.35
Pde6bP23440 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pde6bP23440 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.88□□□□□ -0.35
Pde6bP23440 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pde6bP23440 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pde6bP23440 Gm9358-201ENSMUST00000183067 927 ntBASIC12.88□□□□□ -0.35
Pde6bP23440 Gm29499-201ENSMUST00000189151 486 ntBASIC12.88□□□□□ -0.35
Pde6bP23440 Gm28329-201ENSMUST00000191208 689 ntBASIC12.88□□□□□ -0.35
Pde6bP23440 Gm29171-201ENSMUST00000191397 486 ntBASIC12.88□□□□□ -0.35
Pde6bP23440 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.88□□□□□ -0.35
Pde6bP23440 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.88□□□□□ -0.35
Pde6bP23440 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.88□□□□□ -0.35
Pde6bP23440 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.88□□□□□ -0.35
Pde6bP23440 AC132260.2-201ENSMUST00000224482 344 ntBASIC12.88□□□□□ -0.35
Pde6bP23440 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms