Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.32□□□□□ -0.6
BdnfP21237 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
BdnfP21237 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.32□□□□□ -0.6
BdnfP21237 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
BdnfP21237 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BdnfP21237 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.31□□□□□ -0.6
BdnfP21237 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BdnfP21237 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
BdnfP21237 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.31□□□□□ -0.6
BdnfP21237 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BdnfP21237 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BdnfP21237 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BdnfP21237 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.31□□□□□ -0.6
BdnfP21237 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
BdnfP21237 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
BdnfP21237 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
BdnfP21237 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
BdnfP21237 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BdnfP21237 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BdnfP21237 Gm15370-201ENSMUST00000117158 253 ntBASIC11.31□□□□□ -0.6
BdnfP21237 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.31□□□□□ -0.6
BdnfP21237 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.31□□□□□ -0.6
BdnfP21237 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
BdnfP21237 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
BdnfP21237 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BdnfP21237 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
BdnfP21237 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.31□□□□□ -0.6
BdnfP21237 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BdnfP21237 Gm18711-201ENSMUST00000199341 750 ntBASIC11.31□□□□□ -0.6
BdnfP21237 Gm18054-201ENSMUST00000207539 555 ntBASIC11.31□□□□□ -0.6
BdnfP21237 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.31□□□□□ -0.6
BdnfP21237 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.31□□□□□ -0.6
BdnfP21237 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.31□□□□□ -0.6
BdnfP21237 Morn2-202ENSMUST00000227729 656 ntBASIC11.31□□□□□ -0.6
BdnfP21237 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BdnfP21237 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BdnfP21237 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BdnfP21237 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BdnfP21237 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
BdnfP21237 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BdnfP21237 Gm42941-201ENSMUST00000200347 1321 ntBASIC11.31□□□□□ -0.6
BdnfP21237 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.31□□□□□ -0.6
BdnfP21237 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BdnfP21237 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BdnfP21237 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.3□□□□□ -0.6
BdnfP21237 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
BdnfP21237 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BdnfP21237 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
BdnfP21237 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.3□□□□□ -0.6
BdnfP21237 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BdnfP21237 Gm9877-201ENSMUST00000064271 2627 ntBASIC11.3□□□□□ -0.6
BdnfP21237 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BdnfP21237 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
BdnfP21237 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
BdnfP21237 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.3□□□□□ -0.6
BdnfP21237 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
BdnfP21237 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.3□□□□□ -0.6
BdnfP21237 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.3□□□□□ -0.6
BdnfP21237 Gm42627-201ENSMUST00000197347 224 ntBASIC11.3□□□□□ -0.6
BdnfP21237 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
BdnfP21237 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.3□□□□□ -0.6
BdnfP21237 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.3□□□□□ -0.6
BdnfP21237 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.3□□□□□ -0.6
BdnfP21237 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.3□□□□□ -0.6
BdnfP21237 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
BdnfP21237 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BdnfP21237 Acox2-204ENSMUST00000164598 2907 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BdnfP21237 Btk-202ENSMUST00000113213 2121 ntTSL 5 BASIC11.3□□□□□ -0.6
BdnfP21237 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
BdnfP21237 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BdnfP21237 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BdnfP21237 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BdnfP21237 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
BdnfP21237 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BdnfP21237 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
BdnfP21237 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BdnfP21237 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
BdnfP21237 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BdnfP21237 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Erich3-203ENSMUST00000189969 3460 ntBASIC11.29□□□□□ -0.6
BdnfP21237 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
BdnfP21237 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC11.29□□□□□ -0.6
BdnfP21237 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
BdnfP21237 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
BdnfP21237 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.29□□□□□ -0.6
BdnfP21237 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Gm14441-201ENSMUST00000121960 540 ntBASIC11.29□□□□□ -0.6
BdnfP21237 Gm13786-201ENSMUST00000122371 333 ntBASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms