Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Hoxb9P20615 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.23□□□□□ -0.61
Hoxb9P20615 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.23□□□□□ -0.61
Hoxb9P20615 Gm11439-201ENSMUST00000118598 409 ntBASIC11.23□□□□□ -0.61
Hoxb9P20615 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.23□□□□□ -0.61
Hoxb9P20615 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.23□□□□□ -0.61
Hoxb9P20615 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Hoxb9P20615 Gm25881-201ENSMUST00000157783 103 ntBASIC11.23□□□□□ -0.61
Hoxb9P20615 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Hoxb9P20615 Gm2383-201ENSMUST00000181461 807 ntBASIC11.23□□□□□ -0.61
Hoxb9P20615 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb9P20615 Rps4l-202ENSMUST00000204242 789 ntBASIC11.23□□□□□ -0.61
Hoxb9P20615 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.23□□□□□ -0.61
Hoxb9P20615 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.23□□□□□ -0.61
Hoxb9P20615 Gm18730-201ENSMUST00000218038 343 ntBASIC11.23□□□□□ -0.61
Hoxb9P20615 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.23□□□□□ -0.61
Hoxb9P20615 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Hoxb9P20615 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.23□□□□□ -0.61
Hoxb9P20615 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Hoxb9P20615 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.23□□□□□ -0.61
Hoxb9P20615 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb9P20615 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb9P20615 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.23□□□□□ -0.61
Hoxb9P20615 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Hoxb9P20615 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Hoxb9P20615 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb9P20615 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Hoxb9P20615 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb9P20615 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb9P20615 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb9P20615 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb9P20615 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb9P20615 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb9P20615 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb9P20615 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb9P20615 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb9P20615 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb9P20615 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb9P20615 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb9P20615 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Hoxb9P20615 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb9P20615 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb9P20615 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb9P20615 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Hoxb9P20615 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Hoxb9P20615 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb9P20615 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Hoxb9P20615 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb9P20615 Gm11500-201ENSMUST00000118237 601 ntBASIC11.22□□□□□ -0.61
Hoxb9P20615 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb9P20615 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb9P20615 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb9P20615 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb9P20615 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb9P20615 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb9P20615 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.22□□□□□ -0.61
Hoxb9P20615 Gm18734-201ENSMUST00000172937 808 ntBASIC11.22□□□□□ -0.61
Hoxb9P20615 Gm8815-201ENSMUST00000173809 620 ntBASIC11.22□□□□□ -0.61
Hoxb9P20615 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Hoxb9P20615 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb9P20615 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb9P20615 Gm27552-201ENSMUST00000183351 62 ntBASIC11.22□□□□□ -0.61
Hoxb9P20615 Gm27844-201ENSMUST00000183613 62 ntBASIC11.22□□□□□ -0.61
Hoxb9P20615 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.22□□□□□ -0.61
Hoxb9P20615 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.22□□□□□ -0.61
Hoxb9P20615 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.22□□□□□ -0.61
Hoxb9P20615 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.22□□□□□ -0.61
Hoxb9P20615 Gm2965-201ENSMUST00000198365 343 ntBASIC11.22□□□□□ -0.61
Hoxb9P20615 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.22□□□□□ -0.61
Hoxb9P20615 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb9P20615 Gm45575-201ENSMUST00000210283 548 ntBASIC11.22□□□□□ -0.61
Hoxb9P20615 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.22□□□□□ -0.61
Hoxb9P20615 Gm18212-201ENSMUST00000211678 889 ntBASIC11.22□□□□□ -0.61
Hoxb9P20615 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb9P20615 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.22□□□□□ -0.61
Hoxb9P20615 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.22□□□□□ -0.61
Hoxb9P20615 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb9P20615 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb9P20615 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb9P20615 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Hoxb9P20615 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb9P20615 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb9P20615 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb9P20615 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.22□□□□□ -0.61
Hoxb9P20615 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb9P20615 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb9P20615 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Hoxb9P20615 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.22□□□□□ -0.61
Hoxb9P20615 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Hoxb9P20615 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb9P20615 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb9P20615 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Hoxb9P20615 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxb9P20615 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxb9P20615 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxb9P20615 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxb9P20615 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Hoxb9P20615 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxb9P20615 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxb9P20615 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms