Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.7□□□□□ -0.38
RaraP11416 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.7□□□□□ -0.38
RaraP11416 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RaraP11416 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RaraP11416 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RaraP11416 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RaraP11416 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
RaraP11416 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RaraP11416 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RaraP11416 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RaraP11416 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RaraP11416 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RaraP11416 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RaraP11416 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RaraP11416 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RaraP11416 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.69□□□□□ -0.38
RaraP11416 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RaraP11416 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RaraP11416 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RaraP11416 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RaraP11416 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
RaraP11416 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RaraP11416 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RaraP11416 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.69□□□□□ -0.38
RaraP11416 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RaraP11416 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RaraP11416 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RaraP11416 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
RaraP11416 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
RaraP11416 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RaraP11416 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RaraP11416 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.69□□□□□ -0.38
RaraP11416 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RaraP11416 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RaraP11416 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RaraP11416 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.69□□□□□ -0.38
RaraP11416 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.69□□□□□ -0.38
RaraP11416 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.69□□□□□ -0.38
RaraP11416 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RaraP11416 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.69□□□□□ -0.38
RaraP11416 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RaraP11416 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.69□□□□□ -0.38
RaraP11416 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
RaraP11416 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RaraP11416 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RaraP11416 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RaraP11416 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RaraP11416 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
RaraP11416 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RaraP11416 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RaraP11416 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RaraP11416 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
RaraP11416 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RaraP11416 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
RaraP11416 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RaraP11416 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.69□□□□□ -0.38
RaraP11416 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RaraP11416 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.69□□□□□ -0.38
RaraP11416 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
RaraP11416 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RaraP11416 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RaraP11416 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RaraP11416 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RaraP11416 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RaraP11416 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.68□□□□□ -0.38
RaraP11416 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RaraP11416 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
RaraP11416 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RaraP11416 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.68□□□□□ -0.38
RaraP11416 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RaraP11416 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
RaraP11416 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RaraP11416 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
RaraP11416 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RaraP11416 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
RaraP11416 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RaraP11416 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.68□□□□□ -0.38
RaraP11416 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.68□□□□□ -0.38
RaraP11416 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RaraP11416 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RaraP11416 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.68□□□□□ -0.38
RaraP11416 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC12.68□□□□□ -0.38
RaraP11416 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.68□□□□□ -0.38
RaraP11416 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RaraP11416 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RaraP11416 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.68□□□□□ -0.38
RaraP11416 Cts7-204ENSMUST00000225321 1257 ntBASIC12.68□□□□□ -0.38
RaraP11416 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RaraP11416 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RaraP11416 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.68□□□□□ -0.38
RaraP11416 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RaraP11416 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.68□□□□□ -0.38
RaraP11416 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RaraP11416 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
RaraP11416 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RaraP11416 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RaraP11416 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
RaraP11416 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.68□□□□□ -0.38
RaraP11416 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RaraP11416 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms