Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
UbbP0CG49 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
UbbP0CG49 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UbbP0CG49 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
UbbP0CG49 Gm13875-201ENSMUST00000120162 282 ntBASIC10.23□□□□□ -0.77
UbbP0CG49 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
UbbP0CG49 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.23□□□□□ -0.77
UbbP0CG49 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
UbbP0CG49 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.23□□□□□ -0.77
UbbP0CG49 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.23□□□□□ -0.77
UbbP0CG49 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.23□□□□□ -0.77
UbbP0CG49 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
UbbP0CG49 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.23□□□□□ -0.77
UbbP0CG49 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.23□□□□□ -0.77
UbbP0CG49 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.23□□□□□ -0.77
UbbP0CG49 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UbbP0CG49 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
UbbP0CG49 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.23□□□□□ -0.77
UbbP0CG49 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UbbP0CG49 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
UbbP0CG49 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UbbP0CG49 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
UbbP0CG49 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UbbP0CG49 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UbbP0CG49 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UbbP0CG49 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
UbbP0CG49 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UbbP0CG49 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.23□□□□□ -0.77
UbbP0CG49 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
UbbP0CG49 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.22□□□□□ -0.77
UbbP0CG49 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.22□□□□□ -0.77
UbbP0CG49 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.22□□□□□ -0.77
UbbP0CG49 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.22□□□□□ -0.77
UbbP0CG49 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.22□□□□□ -0.77
UbbP0CG49 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.22□□□□□ -0.77
UbbP0CG49 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 Gm2546-201ENSMUST00000182630 991 ntBASIC10.22□□□□□ -0.77
UbbP0CG49 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.22□□□□□ -0.77
UbbP0CG49 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.22□□□□□ -0.77
UbbP0CG49 Gm43002-201ENSMUST00000200310 155 ntBASIC10.22□□□□□ -0.77
UbbP0CG49 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.22□□□□□ -0.77
UbbP0CG49 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
UbbP0CG49 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.22□□□□□ -0.77
UbbP0CG49 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.22□□□□□ -0.77
UbbP0CG49 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
UbbP0CG49 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.22□□□□□ -0.77
UbbP0CG49 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.22□□□□□ -0.77
UbbP0CG49 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
UbbP0CG49 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
UbbP0CG49 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
UbbP0CG49 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
UbbP0CG49 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
UbbP0CG49 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
UbbP0CG49 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
UbbP0CG49 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
UbbP0CG49 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
UbbP0CG49 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
UbbP0CG49 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
UbbP0CG49 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
UbbP0CG49 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
UbbP0CG49 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
UbbP0CG49 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
UbbP0CG49 Gm14832-201ENSMUST00000121289 322 ntBASIC10.21□□□□□ -0.77
UbbP0CG49 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
UbbP0CG49 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.21□□□□□ -0.77
UbbP0CG49 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC10.21□□□□□ -0.77
UbbP0CG49 Gm13316-201ENSMUST00000140537 691 ntBASIC10.21□□□□□ -0.77
UbbP0CG49 Gm25043-201ENSMUST00000158604 212 ntBASIC10.21□□□□□ -0.77
UbbP0CG49 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
UbbP0CG49 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
UbbP0CG49 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.21□□□□□ -0.77
UbbP0CG49 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.77
UbbP0CG49 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms