Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Gm5419-201ENSMUST00000119301 527 ntBASIC12.82□□□□□ -0.36
Chmp6P0C0A3 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Gm5616-201ENSMUST00000165252 384 ntBASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Gm8741-201ENSMUST00000174736 384 ntBASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp6P0C0A3 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Gm37666-201ENSMUST00000194110 866 ntBASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Gm17931-201ENSMUST00000208132 634 ntBASIC12.81□□□□□ -0.36
Chmp6P0C0A3 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Chmp6P0C0A3 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp6P0C0A3 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp6P0C0A3 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp6P0C0A3 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Chmp6P0C0A3 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.8□□□□□ -0.36
Chmp6P0C0A3 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Chmp6P0C0A3 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp6P0C0A3 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Chmp6P0C0A3 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.8□□□□□ -0.36
Chmp6P0C0A3 Gm23949-201ENSMUST00000104027 127 ntBASIC12.8□□□□□ -0.36
Chmp6P0C0A3 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.8□□□□□ -0.36
Chmp6P0C0A3 Gm12380-201ENSMUST00000119012 544 ntBASIC12.8□□□□□ -0.36
Chmp6P0C0A3 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp6P0C0A3 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp6P0C0A3 Gm8956-201ENSMUST00000203939 825 ntBASIC12.8□□□□□ -0.36
Chmp6P0C0A3 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.8□□□□□ -0.36
Chmp6P0C0A3 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.8□□□□□ -0.36
Chmp6P0C0A3 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.8□□□□□ -0.36
Chmp6P0C0A3 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp6P0C0A3 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp6P0C0A3 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Chmp6P0C0A3 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp6P0C0A3 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp6P0C0A3 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp6P0C0A3 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp6P0C0A3 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms