Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC15.15■□□□□ 0.02
Hoxc9P09633 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc9P09633 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc9P09633 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc9P09633 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC15.14■□□□□ 0.01
Hoxc9P09633 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC15.14■□□□□ 0.01
Hoxc9P09633 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc9P09633 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Hoxc9P09633 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Hoxc9P09633 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc9P09633 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc9P09633 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC15.14■□□□□ 0.01
Hoxc9P09633 AC165351.1-201ENSMUST00000219078 2020 ntBASIC15.14■□□□□ 0.01
Hoxc9P09633 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc9P09633 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc9P09633 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc9P09633 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc9P09633 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc9P09633 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc9P09633 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC15.14■□□□□ 0.01
Hoxc9P09633 Gm11560-201ENSMUST00000117567 948 ntBASIC15.14■□□□□ 0.01
Hoxc9P09633 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC15.14■□□□□ 0.01
Hoxc9P09633 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc9P09633 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc9P09633 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC15.14■□□□□ 0.01
Hoxc9P09633 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC15.14■□□□□ 0.01
Hoxc9P09633 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC15.14■□□□□ 0.01
Hoxc9P09633 Gm26989-201ENSMUST00000182608 749 ntBASIC15.14■□□□□ 0.01
Hoxc9P09633 Gm29067-201ENSMUST00000190821 470 ntBASIC15.14■□□□□ 0.01
Hoxc9P09633 Gm37284-201ENSMUST00000193607 539 ntBASIC15.14■□□□□ 0.01
Hoxc9P09633 Gm17889-201ENSMUST00000198410 598 ntBASIC15.14■□□□□ 0.01
Hoxc9P09633 AC134248.1-201ENSMUST00000216113 1176 ntBASIC15.14■□□□□ 0.01
Hoxc9P09633 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC15.14■□□□□ 0.01
Hoxc9P09633 AC154572.1-201ENSMUST00000226098 1204 ntBASIC15.14■□□□□ 0.01
Hoxc9P09633 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc9P09633 Gm8325-201ENSMUST00000099086 453 ntBASIC15.14■□□□□ 0.01
Hoxc9P09633 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc9P09633 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC15.14■□□□□ 0.01
Hoxc9P09633 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Hoxc9P09633 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc9P09633 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Hoxc9P09633 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc9P09633 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc9P09633 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC15.14■□□□□ 0.01
Hoxc9P09633 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc9P09633 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Hoxc9P09633 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC15.14■□□□□ 0.01
Hoxc9P09633 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc9P09633 AC125108.1-201ENSMUST00000218986 2330 ntBASIC15.14■□□□□ 0.01
Hoxc9P09633 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc9P09633 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxc9P09633 Gm7841-201ENSMUST00000122108 1629 ntBASIC15.14■□□□□ 0.01
Hoxc9P09633 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc9P09633 Gm43242-201ENSMUST00000199507 1776 ntBASIC15.13■□□□□ 0.01
Hoxc9P09633 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Hoxc9P09633 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc9P09633 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc9P09633 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Hoxc9P09633 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc9P09633 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc9P09633 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc9P09633 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Hoxc9P09633 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc9P09633 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc9P09633 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC15.13■□□□□ 0.01
Hoxc9P09633 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC15.13■□□□□ 0.01
Hoxc9P09633 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Hoxc9P09633 Gm13351-201ENSMUST00000118087 414 ntBASIC15.13■□□□□ 0.01
Hoxc9P09633 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc9P09633 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc9P09633 Gm24992-201ENSMUST00000157412 130 ntBASIC15.13■□□□□ 0.01
Hoxc9P09633 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc9P09633 Gm26982-201ENSMUST00000182250 1151 ntBASIC15.13■□□□□ 0.01
Hoxc9P09633 Gm28833-201ENSMUST00000189671 559 ntBASIC15.13■□□□□ 0.01
Hoxc9P09633 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Hoxc9P09633 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC15.13■□□□□ 0.01
Hoxc9P09633 Gm5599-201ENSMUST00000209602 788 ntBASIC15.13■□□□□ 0.01
Hoxc9P09633 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Hoxc9P09633 Mt1-202ENSMUST00000211807 1085 ntBASIC15.13■□□□□ 0.01
Hoxc9P09633 CT025602.2-201ENSMUST00000226553 772 ntBASIC15.13■□□□□ 0.01
Hoxc9P09633 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc9P09633 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc9P09633 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc9P09633 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Hoxc9P09633 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Hoxc9P09633 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Hoxc9P09633 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Hoxc9P09633 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc9P09633 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc9P09633 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxc9P09633 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Hoxc9P09633 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxc9P09633 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxc9P09633 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxc9P09633 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Hoxc9P09633 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxc9P09633 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxc9P09633 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxc9P09633 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC15.12■□□□□ 0.01
Hoxc9P09633 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms