Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PdgfrbP05622 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
PdgfrbP05622 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
PdgfrbP05622 AC154828.2-201ENSMUST00000220908 1070 ntBASIC11.95□□□□□ -0.5
PdgfrbP05622 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
PdgfrbP05622 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
PdgfrbP05622 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.95□□□□□ -0.5
PdgfrbP05622 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PdgfrbP05622 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
PdgfrbP05622 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PdgfrbP05622 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.95□□□□□ -0.5
PdgfrbP05622 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PdgfrbP05622 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PdgfrbP05622 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
PdgfrbP05622 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PdgfrbP05622 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
PdgfrbP05622 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
PdgfrbP05622 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.94□□□□□ -0.5
PdgfrbP05622 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
PdgfrbP05622 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.94□□□□□ -0.5
PdgfrbP05622 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
PdgfrbP05622 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.94□□□□□ -0.5
PdgfrbP05622 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.94□□□□□ -0.5
PdgfrbP05622 Gm11509-201ENSMUST00000117358 325 ntBASIC11.94□□□□□ -0.5
PdgfrbP05622 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.94□□□□□ -0.5
PdgfrbP05622 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Csnk1a1-208ENSMUST00000167187 1222 ntTSL 5 BASIC11.94□□□□□ -0.5
PdgfrbP05622 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Gm6114-201ENSMUST00000182472 968 ntBASIC11.94□□□□□ -0.5
PdgfrbP05622 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.94□□□□□ -0.5
PdgfrbP05622 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.94□□□□□ -0.5
PdgfrbP05622 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC11.94□□□□□ -0.5
PdgfrbP05622 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Gm5705-201ENSMUST00000066241 711 ntBASIC11.94□□□□□ -0.5
PdgfrbP05622 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.94□□□□□ -0.5
PdgfrbP05622 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
PdgfrbP05622 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.94□□□□□ -0.5
PdgfrbP05622 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
PdgfrbP05622 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
PdgfrbP05622 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
PdgfrbP05622 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
PdgfrbP05622 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
PdgfrbP05622 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
PdgfrbP05622 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.93□□□□□ -0.5
PdgfrbP05622 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
PdgfrbP05622 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
PdgfrbP05622 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
PdgfrbP05622 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
PdgfrbP05622 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
PdgfrbP05622 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
PdgfrbP05622 Gm15711-201ENSMUST00000118889 535 ntBASIC11.93□□□□□ -0.5
PdgfrbP05622 Gm12380-201ENSMUST00000119012 544 ntBASIC11.93□□□□□ -0.5
PdgfrbP05622 Gm15808-201ENSMUST00000119046 604 ntBASIC11.93□□□□□ -0.5
PdgfrbP05622 Gm14208-201ENSMUST00000119645 678 ntBASIC11.93□□□□□ -0.5
PdgfrbP05622 Gm11660-201ENSMUST00000120955 412 ntBASIC11.93□□□□□ -0.5
PdgfrbP05622 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.93□□□□□ -0.5
PdgfrbP05622 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
PdgfrbP05622 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.93□□□□□ -0.5
PdgfrbP05622 Gm4857-201ENSMUST00000192718 785 ntBASIC11.93□□□□□ -0.5
PdgfrbP05622 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.93□□□□□ -0.5
PdgfrbP05622 Gm5708-201ENSMUST00000196289 886 ntBASIC11.93□□□□□ -0.5
PdgfrbP05622 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.93□□□□□ -0.5
PdgfrbP05622 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC11.93□□□□□ -0.5
PdgfrbP05622 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.93□□□□□ -0.5
PdgfrbP05622 Gm45072-201ENSMUST00000208673 929 ntBASIC11.93□□□□□ -0.5
PdgfrbP05622 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
PdgfrbP05622 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.93□□□□□ -0.5
PdgfrbP05622 Gm9797-202ENSMUST00000218003 294 ntBASIC11.93□□□□□ -0.5
PdgfrbP05622 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
PdgfrbP05622 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.93□□□□□ -0.5
PdgfrbP05622 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
PdgfrbP05622 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms