Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.29□□□□□ -0.6
Hcn1O88704 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Hcn1O88704 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.29□□□□□ -0.6
Hcn1O88704 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.29□□□□□ -0.6
Hcn1O88704 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.29□□□□□ -0.6
Hcn1O88704 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Hcn1O88704 Gm29199-201ENSMUST00000187766 775 ntBASIC11.29□□□□□ -0.6
Hcn1O88704 Gm44882-201ENSMUST00000205702 802 ntBASIC11.29□□□□□ -0.6
Hcn1O88704 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.29□□□□□ -0.6
Hcn1O88704 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Hcn1O88704 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Hcn1O88704 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.28□□□□□ -0.6
Hcn1O88704 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hcn1O88704 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Hcn1O88704 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcn1O88704 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hcn1O88704 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hcn1O88704 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.28□□□□□ -0.6
Hcn1O88704 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hcn1O88704 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Hcn1O88704 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcn1O88704 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcn1O88704 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcn1O88704 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Hcn1O88704 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.28□□□□□ -0.6
Hcn1O88704 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcn1O88704 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hcn1O88704 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Hcn1O88704 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.28□□□□□ -0.6
Hcn1O88704 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.28□□□□□ -0.6
Hcn1O88704 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcn1O88704 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.28□□□□□ -0.6
Hcn1O88704 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.28□□□□□ -0.6
Hcn1O88704 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Hcn1O88704 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hcn1O88704 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.28□□□□□ -0.6
Hcn1O88704 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hcn1O88704 Gm44262-201ENSMUST00000204969 372 ntBASIC11.28□□□□□ -0.6
Hcn1O88704 Gm45186-201ENSMUST00000206874 478 ntBASIC11.28□□□□□ -0.6
Hcn1O88704 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.28□□□□□ -0.6
Hcn1O88704 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.28□□□□□ -0.6
Hcn1O88704 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.28□□□□□ -0.6
Hcn1O88704 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Hcn1O88704 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hcn1O88704 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Hcn1O88704 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcn1O88704 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Hcn1O88704 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcn1O88704 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Hcn1O88704 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hcn1O88704 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hcn1O88704 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcn1O88704 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hcn1O88704 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.28□□□□□ -0.6
Hcn1O88704 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcn1O88704 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcn1O88704 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcn1O88704 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcn1O88704 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcn1O88704 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hcn1O88704 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hcn1O88704 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Hcn1O88704 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Hcn1O88704 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Hcn1O88704 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Hcn1O88704 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hcn1O88704 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.27□□□□□ -0.6
Hcn1O88704 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hcn1O88704 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hcn1O88704 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Hcn1O88704 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.27□□□□□ -0.61
Hcn1O88704 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Hcn1O88704 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms