Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ubr1O70481 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ubr1O70481 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ubr1O70481 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ubr1O70481 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC14.97□□□□□ -0.01
Ubr1O70481 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ubr1O70481 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ubr1O70481 Gm25830-201ENSMUST00000158923 132 ntBASIC14.97□□□□□ -0.01
Ubr1O70481 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ubr1O70481 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ubr1O70481 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ubr1O70481 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ubr1O70481 Gm31274-201ENSMUST00000197356 229 ntBASIC14.97□□□□□ -0.01
Ubr1O70481 Gm43506-201ENSMUST00000200675 753 ntBASIC14.97□□□□□ -0.01
Ubr1O70481 Gm35960-201ENSMUST00000202712 767 ntBASIC14.97□□□□□ -0.01
Ubr1O70481 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ubr1O70481 AC162932.1-201ENSMUST00000219209 872 ntBASIC14.97□□□□□ -0.01
Ubr1O70481 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ubr1O70481 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ubr1O70481 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ubr1O70481 Gm37014-201ENSMUST00000194723 2253 ntBASIC14.97□□□□□ -0.01
Ubr1O70481 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ubr1O70481 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ubr1O70481 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ubr1O70481 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ubr1O70481 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ubr1O70481 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Ubr1O70481 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ubr1O70481 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ubr1O70481 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ubr1O70481 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ubr1O70481 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Ubr1O70481 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ubr1O70481 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC14.96□□□□□ -0.01
Ubr1O70481 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC14.96□□□□□ -0.01
Ubr1O70481 Gm9162-201ENSMUST00000182081 991 ntBASIC14.96□□□□□ -0.01
Ubr1O70481 Mir6941-201ENSMUST00000184711 59 ntBASIC14.96□□□□□ -0.01
Ubr1O70481 Gm43969-201ENSMUST00000204833 535 ntBASIC14.96□□□□□ -0.01
Ubr1O70481 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ubr1O70481 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC14.96□□□□□ -0.01
Ubr1O70481 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ubr1O70481 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ubr1O70481 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.96□□□□□ -0.01
Ubr1O70481 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ubr1O70481 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ubr1O70481 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ubr1O70481 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ubr1O70481 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ubr1O70481 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ubr1O70481 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ubr1O70481 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ubr1O70481 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC14.96□□□□□ -0.01
Ubr1O70481 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ubr1O70481 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC14.96□□□□□ -0.02
Ubr1O70481 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Ubr1O70481 Mir453-201ENSMUST00000104732 82 ntBASIC14.96□□□□□ -0.02
Ubr1O70481 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.02
Ubr1O70481 Gm15196-201ENSMUST00000121406 482 ntBASIC14.96□□□□□ -0.02
Ubr1O70481 Gm16165-201ENSMUST00000160140 795 ntBASIC14.96□□□□□ -0.02
Ubr1O70481 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC14.96□□□□□ -0.02
Ubr1O70481 Gm9507-202ENSMUST00000180157 654 ntBASIC14.96□□□□□ -0.02
Ubr1O70481 Mir6923-201ENSMUST00000184592 72 ntBASIC14.96□□□□□ -0.02
Ubr1O70481 Gm6423-201ENSMUST00000204315 934 ntBASIC14.96□□□□□ -0.02
Ubr1O70481 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC14.96□□□□□ -0.02
Ubr1O70481 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ubr1O70481 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubr1O70481 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubr1O70481 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubr1O70481 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubr1O70481 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ubr1O70481 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ubr1O70481 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubr1O70481 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ubr1O70481 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubr1O70481 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC14.95□□□□□ -0.02
Ubr1O70481 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ubr1O70481 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubr1O70481 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubr1O70481 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubr1O70481 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ubr1O70481 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubr1O70481 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ubr1O70481 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ubr1O70481 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubr1O70481 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubr1O70481 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ubr1O70481 Gm22846-201ENSMUST00000157706 270 ntBASIC14.95□□□□□ -0.02
Ubr1O70481 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubr1O70481 Gm9916-201ENSMUST00000192943 1228 ntBASIC14.95□□□□□ -0.02
Ubr1O70481 Gm20781-201ENSMUST00000193154 693 ntBASIC14.95□□□□□ -0.02
Ubr1O70481 Gm21736-201ENSMUST00000195399 693 ntBASIC14.95□□□□□ -0.02
Ubr1O70481 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC14.95□□□□□ -0.02
Ubr1O70481 Gm2448-201ENSMUST00000207080 559 ntBASIC14.95□□□□□ -0.02
Ubr1O70481 Gm45085-201ENSMUST00000209100 441 ntBASIC14.95□□□□□ -0.02
Ubr1O70481 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC14.95□□□□□ -0.02
Ubr1O70481 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
Ubr1O70481 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ubr1O70481 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubr1O70481 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubr1O70481 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms