Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trdmt1O55055 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trdmt1O55055 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Trdmt1O55055 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.92□□□□□ -0.34
Trdmt1O55055 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Trdmt1O55055 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Trdmt1O55055 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trdmt1O55055 Gm14270-201ENSMUST00000118388 846 ntBASIC12.92□□□□□ -0.34
Trdmt1O55055 Gm12274-201ENSMUST00000120062 385 ntBASIC12.92□□□□□ -0.34
Trdmt1O55055 Gm16219-201ENSMUST00000120096 274 ntBASIC12.92□□□□□ -0.34
Trdmt1O55055 Gm25492-201ENSMUST00000157383 129 ntBASIC12.92□□□□□ -0.34
Trdmt1O55055 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.92□□□□□ -0.34
Trdmt1O55055 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.92□□□□□ -0.34
Trdmt1O55055 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trdmt1O55055 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 Gm45592-201ENSMUST00000209605 1043 ntBASIC12.92□□□□□ -0.34
Trdmt1O55055 Gm39288-201ENSMUST00000210554 446 ntBASIC12.92□□□□□ -0.34
Trdmt1O55055 Gm9111-201ENSMUST00000219394 709 ntBASIC12.92□□□□□ -0.34
Trdmt1O55055 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.92□□□□□ -0.34
Trdmt1O55055 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.92□□□□□ -0.34
Trdmt1O55055 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.92□□□□□ -0.34
Trdmt1O55055 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trdmt1O55055 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trdmt1O55055 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdmt1O55055 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdmt1O55055 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trdmt1O55055 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdmt1O55055 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdmt1O55055 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdmt1O55055 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdmt1O55055 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdmt1O55055 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trdmt1O55055 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdmt1O55055 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.91□□□□□ -0.34
Trdmt1O55055 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdmt1O55055 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trdmt1O55055 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
Trdmt1O55055 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trdmt1O55055 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdmt1O55055 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trdmt1O55055 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.91□□□□□ -0.34
Trdmt1O55055 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trdmt1O55055 Gm25554-201ENSMUST00000158075 113 ntBASIC12.91□□□□□ -0.34
Trdmt1O55055 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.91□□□□□ -0.34
Trdmt1O55055 Gm20495-201ENSMUST00000173902 235 ntBASIC12.91□□□□□ -0.34
Trdmt1O55055 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.91□□□□□ -0.34
Trdmt1O55055 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trdmt1O55055 Gm17889-201ENSMUST00000198410 598 ntBASIC12.91□□□□□ -0.34
Trdmt1O55055 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trdmt1O55055 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.91□□□□□ -0.34
Trdmt1O55055 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.91□□□□□ -0.34
Trdmt1O55055 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdmt1O55055 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trdmt1O55055 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.91□□□□□ -0.34
Trdmt1O55055 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.91□□□□□ -0.34
Trdmt1O55055 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdmt1O55055 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdmt1O55055 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdmt1O55055 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trdmt1O55055 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trdmt1O55055 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.91□□□□□ -0.34
Trdmt1O55055 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdmt1O55055 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdmt1O55055 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdmt1O55055 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trdmt1O55055 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trdmt1O55055 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.9□□□□□ -0.34
Trdmt1O55055 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdmt1O55055 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trdmt1O55055 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trdmt1O55055 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trdmt1O55055 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 201.7 ms