Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC9.94□□□□□ -0.82
Cxcl13O55038 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC9.94□□□□□ -0.82
Cxcl13O55038 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
Cxcl13O55038 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 AC154517.2-201ENSMUST00000220829 2458 ntBASIC9.94□□□□□ -0.82
Cxcl13O55038 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
Cxcl13O55038 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 AC166836.1-201ENSMUST00000219933 1795 ntBASIC9.94□□□□□ -0.82
Cxcl13O55038 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC9.94□□□□□ -0.82
Cxcl13O55038 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Cxcl13O55038 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Cxcl13O55038 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Cxcl13O55038 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC9.94□□□□□ -0.82
Cxcl13O55038 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 Gm27438-201ENSMUST00000183480 110 ntBASIC9.94□□□□□ -0.82
Cxcl13O55038 Mir7076-201ENSMUST00000183519 74 ntBASIC9.94□□□□□ -0.82
Cxcl13O55038 Gm3551-201ENSMUST00000190750 664 ntBASIC9.94□□□□□ -0.82
Cxcl13O55038 Gm37981-201ENSMUST00000194280 535 ntBASIC9.94□□□□□ -0.82
Cxcl13O55038 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Cxcl13O55038 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Cxcl13O55038 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Cxcl13O55038 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC9.94□□□□□ -0.82
Cxcl13O55038 AC093022.4-203ENSMUST00000228523 2657 ntBASIC9.94□□□□□ -0.82
Cxcl13O55038 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
Cxcl13O55038 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Cxcl13O55038 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Cxcl13O55038 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Cxcl13O55038 CT009757.3-201ENSMUST00000223367 2320 ntBASIC9.94□□□□□ -0.82
Cxcl13O55038 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC9.94□□□□□ -0.82
Cxcl13O55038 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cxcl13O55038 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Cxcl13O55038 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cxcl13O55038 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cxcl13O55038 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cxcl13O55038 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Cxcl13O55038 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cxcl13O55038 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cxcl13O55038 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC9.93□□□□□ -0.82
Cxcl13O55038 Gm9089-201ENSMUST00000122027 526 ntBASIC9.93□□□□□ -0.82
Cxcl13O55038 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC9.93□□□□□ -0.82
Cxcl13O55038 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Cxcl13O55038 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Cxcl13O55038 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC9.93□□□□□ -0.82
Cxcl13O55038 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC9.93□□□□□ -0.82
Cxcl13O55038 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC9.93□□□□□ -0.82
Cxcl13O55038 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC9.93□□□□□ -0.82
Cxcl13O55038 AC134869.4-202ENSMUST00000224350 837 ntBASIC9.93□□□□□ -0.82
Cxcl13O55038 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Cxcl13O55038 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Cxcl13O55038 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Cxcl13O55038 Gm4978-201ENSMUST00000071565 801 ntBASIC9.93□□□□□ -0.82
Cxcl13O55038 Gm37105-201ENSMUST00000192251 2085 ntBASIC9.93□□□□□ -0.82
Cxcl13O55038 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Cxcl13O55038 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cxcl13O55038 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cxcl13O55038 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cxcl13O55038 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cxcl13O55038 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cxcl13O55038 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cxcl13O55038 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cxcl13O55038 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cxcl13O55038 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cxcl13O55038 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC9.93□□□□□ -0.82
Cxcl13O55038 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Cxcl13O55038 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cxcl13O55038 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cxcl13O55038 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cxcl13O55038 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cxcl13O55038 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cxcl13O55038 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cxcl13O55038 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cxcl13O55038 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Cxcl13O55038 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cxcl13O55038 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cxcl13O55038 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms