Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NpcdF8VQB8 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Gm12906-201ENSMUST00000154610 441 ntBASIC14.18□□□□□ -0.14
NpcdF8VQB8 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Gm16167-201ENSMUST00000160428 1065 ntBASIC14.18□□□□□ -0.14
NpcdF8VQB8 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NpcdF8VQB8 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC14.18□□□□□ -0.14
NpcdF8VQB8 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Gm8574-201ENSMUST00000203207 924 ntBASIC14.18□□□□□ -0.14
NpcdF8VQB8 Gm7082-201ENSMUST00000209880 969 ntBASIC14.18□□□□□ -0.14
NpcdF8VQB8 CT030135.2-201ENSMUST00000225255 893 ntBASIC14.18□□□□□ -0.14
NpcdF8VQB8 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NpcdF8VQB8 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
NpcdF8VQB8 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
NpcdF8VQB8 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NpcdF8VQB8 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NpcdF8VQB8 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NpcdF8VQB8 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NpcdF8VQB8 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NpcdF8VQB8 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.17□□□□□ -0.14
NpcdF8VQB8 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NpcdF8VQB8 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NpcdF8VQB8 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NpcdF8VQB8 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NpcdF8VQB8 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NpcdF8VQB8 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NpcdF8VQB8 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC14.17□□□□□ -0.14
NpcdF8VQB8 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.17□□□□□ -0.14
NpcdF8VQB8 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NpcdF8VQB8 Mir6941-201ENSMUST00000184711 59 ntBASIC14.17□□□□□ -0.14
NpcdF8VQB8 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NpcdF8VQB8 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NpcdF8VQB8 Gm5513-201ENSMUST00000072982 1218 ntBASIC14.17□□□□□ -0.14
NpcdF8VQB8 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NpcdF8VQB8 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
NpcdF8VQB8 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NpcdF8VQB8 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NpcdF8VQB8 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NpcdF8VQB8 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NpcdF8VQB8 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NpcdF8VQB8 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NpcdF8VQB8 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NpcdF8VQB8 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NpcdF8VQB8 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NpcdF8VQB8 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NpcdF8VQB8 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
NpcdF8VQB8 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.17□□□□□ -0.14
NpcdF8VQB8 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NpcdF8VQB8 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NpcdF8VQB8 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NpcdF8VQB8 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NpcdF8VQB8 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NpcdF8VQB8 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NpcdF8VQB8 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NpcdF8VQB8 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NpcdF8VQB8 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NpcdF8VQB8 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC14.16□□□□□ -0.14
NpcdF8VQB8 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NpcdF8VQB8 Gm20414-201ENSMUST00000172918 646 ntBASIC14.16□□□□□ -0.14
NpcdF8VQB8 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC14.16□□□□□ -0.14
NpcdF8VQB8 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NpcdF8VQB8 Gm37852-201ENSMUST00000193027 350 ntBASIC14.16□□□□□ -0.14
NpcdF8VQB8 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NpcdF8VQB8 Gm18561-201ENSMUST00000206027 804 ntBASIC14.16□□□□□ -0.14
NpcdF8VQB8 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NpcdF8VQB8 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.16□□□□□ -0.14
NpcdF8VQB8 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NpcdF8VQB8 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NpcdF8VQB8 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NpcdF8VQB8 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NpcdF8VQB8 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.16□□□□□ -0.14
NpcdF8VQB8 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms