Protein–RNA interactions for Protein: F8VPU6

Usp9y, Ubiquitin-specific peptidase 9, Y chromosome, mousemouse

Predictions only

Length 2,556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9yF8VPU6 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Gm4943-201ENSMUST00000132879 424 ntBASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Gm21577-201ENSMUST00000190823 697 ntBASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Gm20802-201ENSMUST00000190832 698 ntBASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Gm10263-201ENSMUST00000085163 300 ntBASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 AU015228-201ENSMUST00000121103 1320 ntBASIC9.35□□□□□ -0.91
Usp9yF8VPU6 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Gm3052-202ENSMUST00000188254 2224 ntBASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Paupar-201ENSMUST00000194826 3482 ntBASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Gm14829-201ENSMUST00000121499 1138 ntBASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 AC129217.1-201ENSMUST00000225181 642 ntBASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Gm6189-201ENSMUST00000164487 2082 ntBASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Gm21358-201ENSMUST00000191645 1659 ntBASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Gm42655-201ENSMUST00000202782 1134 ntBASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Gm2594-201ENSMUST00000214774 742 ntBASIC9.34□□□□□ -0.91
Usp9yF8VPU6 AC125409.3-201ENSMUST00000223488 653 ntBASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Gm23105-201ENSMUST00000083719 134 ntBASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Gm12009-201ENSMUST00000121361 1100 ntBASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Gm4895-201ENSMUST00000181646 1137 ntBASIC9.34□□□□□ -0.91
Usp9yF8VPU6 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC9.34□□□□□ -0.91
Usp9yF8VPU6 AC164556.1-201ENSMUST00000221318 751 ntBASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Gm28323-201ENSMUST00000186817 2499 ntBASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9yF8VPU6 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.92
Usp9yF8VPU6 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.92
Usp9yF8VPU6 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Usp9yF8VPU6 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Usp9yF8VPU6 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Usp9yF8VPU6 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Usp9yF8VPU6 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms