Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Gm11836-201ENSMUST00000121022 441 ntBASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Mir1943-201ENSMUST00000158276 73 ntBASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Gm20495-201ENSMUST00000173902 235 ntBASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Gm5523-201ENSMUST00000180415 997 ntBASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Gm17831-201ENSMUST00000205579 900 ntBASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Gm22902-201ENSMUST00000158488 302 ntBASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Gm18065-201ENSMUST00000221395 526 ntBASIC12.63□□□□□ -0.39
Clca3bE9PUL3 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Gm4978-201ENSMUST00000071565 801 ntBASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clca3bE9PUL3 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Clca3bE9PUL3 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clca3bE9PUL3 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.62□□□□□ -0.39
Clca3bE9PUL3 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.62□□□□□ -0.39
Clca3bE9PUL3 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.62□□□□□ -0.39
Clca3bE9PUL3 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.62□□□□□ -0.39
Clca3bE9PUL3 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clca3bE9PUL3 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.62□□□□□ -0.39
Clca3bE9PUL3 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clca3bE9PUL3 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clca3bE9PUL3 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clca3bE9PUL3 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clca3bE9PUL3 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clca3bE9PUL3 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.62□□□□□ -0.39
Clca3bE9PUL3 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clca3bE9PUL3 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.62□□□□□ -0.39
Clca3bE9PUL3 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clca3bE9PUL3 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Clca3bE9PUL3 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Clca3bE9PUL3 Gm12419-201ENSMUST00000116649 636 ntBASIC12.62□□□□□ -0.39
Clca3bE9PUL3 Gm16166-201ENSMUST00000118291 787 ntBASIC12.62□□□□□ -0.39
Clca3bE9PUL3 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.62□□□□□ -0.39
Clca3bE9PUL3 Gm7150-201ENSMUST00000122032 981 ntBASIC12.62□□□□□ -0.39
Clca3bE9PUL3 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clca3bE9PUL3 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clca3bE9PUL3 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clca3bE9PUL3 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.62□□□□□ -0.39
Clca3bE9PUL3 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms