Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Gm24845-201ENSMUST00000158034 109 ntBASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Gm3961-201ENSMUST00000204425 994 ntBASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Gm45865-201ENSMUST00000211815 945 ntBASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28043E0CXC2 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Gm24934-201ENSMUST00000103764 111 ntBASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Gm6334-201ENSMUST00000207083 228 ntBASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28043E0CXC2 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28043E0CXC2 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28043E0CXC2 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28043E0CXC2 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28043E0CXC2 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Gm28043E0CXC2 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28043E0CXC2 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.8□□□□□ -0.52
Gm28043E0CXC2 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28043E0CXC2 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Gm28043E0CXC2 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.8□□□□□ -0.52
Gm28043E0CXC2 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28043E0CXC2 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.8□□□□□ -0.52
Gm28043E0CXC2 Gm43179-201ENSMUST00000198797 275 ntBASIC11.8□□□□□ -0.52
Gm28043E0CXC2 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.8□□□□□ -0.52
Gm28043E0CXC2 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28043E0CXC2 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms