Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hfm1D3Z4R1 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hfm1D3Z4R1 Gm26616-202ENSMUST00000195676 3107 ntBASIC16.27■□□□□ 0.2
Hfm1D3Z4R1 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hfm1D3Z4R1 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Hfm1D3Z4R1 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.2
Hfm1D3Z4R1 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Hfm1D3Z4R1 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.19
Hfm1D3Z4R1 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hfm1D3Z4R1 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hfm1D3Z4R1 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hfm1D3Z4R1 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Hfm1D3Z4R1 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC16.27■□□□□ 0.19
Hfm1D3Z4R1 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC16.27■□□□□ 0.19
Hfm1D3Z4R1 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Hfm1D3Z4R1 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC16.27■□□□□ 0.19
Hfm1D3Z4R1 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Hfm1D3Z4R1 Gm42599-201ENSMUST00000201308 469 ntBASIC16.27■□□□□ 0.19
Hfm1D3Z4R1 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC16.27■□□□□ 0.19
Hfm1D3Z4R1 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC16.27■□□□□ 0.19
Hfm1D3Z4R1 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Hfm1D3Z4R1 AC134601.2-201ENSMUST00000221071 130 ntBASIC16.27■□□□□ 0.19
Hfm1D3Z4R1 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hfm1D3Z4R1 AC156790.2-201ENSMUST00000227115 568 ntBASIC16.27■□□□□ 0.19
Hfm1D3Z4R1 AC105408.1-201ENSMUST00000227771 802 ntBASIC16.27■□□□□ 0.19
Hfm1D3Z4R1 AC137871.1-201ENSMUST00000228278 475 ntBASIC16.27■□□□□ 0.19
Hfm1D3Z4R1 Gm7841-201ENSMUST00000122108 1629 ntBASIC16.27■□□□□ 0.19
Hfm1D3Z4R1 Gm43167-201ENSMUST00000202001 1606 ntBASIC16.27■□□□□ 0.19
Hfm1D3Z4R1 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
Hfm1D3Z4R1 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hfm1D3Z4R1 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hfm1D3Z4R1 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hfm1D3Z4R1 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Hfm1D3Z4R1 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Gm9947-201ENSMUST00000067599 2920 ntBASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Gm23769-201ENSMUST00000104441 121 ntBASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Gm1826-201ENSMUST00000118646 1162 ntBASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Gm11700-201ENSMUST00000119409 403 ntBASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Gm13827-201ENSMUST00000148801 372 ntBASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Gm7589-201ENSMUST00000085631 534 ntBASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Gm37651-201ENSMUST00000194679 1494 ntBASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Gm37014-201ENSMUST00000194723 2253 ntBASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Gm28424-201ENSMUST00000187393 1319 ntBASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Gm6641-201ENSMUST00000196100 1315 ntBASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hfm1D3Z4R1 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Gm12912-201ENSMUST00000121596 1381 ntBASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Gm44292-201ENSMUST00000205194 2364 ntBASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Gm22344-201ENSMUST00000122642 278 ntBASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Olfml3-204ENSMUST00000169286 874 ntBASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Gm42751-201ENSMUST00000198065 559 ntBASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Gm44008-201ENSMUST00000204345 412 ntBASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Gm5513-201ENSMUST00000072982 1218 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms