Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Gm42651-201ENSMUST00000199851 1339 ntBASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Phactr1-214ENSMUST00000149235 2076 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Mir675-201ENSMUST00000102320 84 ntBASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Mir1900-201ENSMUST00000122714 78 ntBASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Gm19705-204ENSMUST00000181524 413 ntTSL 2 BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Gm16470-201ENSMUST00000182456 998 ntBASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Gm27953-201ENSMUST00000185171 143 ntBASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Gm5982-201ENSMUST00000196234 512 ntBASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Gm9353-201ENSMUST00000200472 604 ntBASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Gm45795-201ENSMUST00000211847 400 ntBASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Gm24146-201ENSMUST00000082760 321 ntBASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Gm28370-201ENSMUST00000185303 3375 ntTSL 5 BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Gm12047-201ENSMUST00000117561 944 ntBASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Gm13592-201ENSMUST00000118148 1010 ntBASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Gm12424-201ENSMUST00000179673 447 ntBASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Mir7221-201ENSMUST00000184009 72 ntBASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Gnpnat1-202ENSMUST00000226276 710 ntBASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Gm5424-201ENSMUST00000053865 1240 ntBASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmcn1D3YXG0 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Eif2b3-201ENSMUST00000070610 1369 ntTSL 5 BASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Cep70-209ENSMUST00000191335 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Olfr1424-202ENSMUST00000207681 1714 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Gm43134-201ENSMUST00000199434 1886 ntBASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Gm44039-201ENSMUST00000204192 2246 ntBASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Pax5-202ENSMUST00000102932 1460 ntTSL 5 BASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Gm22669-201ENSMUST00000158723 318 ntBASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Gm23694-201ENSMUST00000179335 110 ntBASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Gm42732-201ENSMUST00000202887 1197 ntBASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 AC165092.1-201ENSMUST00000224018 486 ntBASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Hmcn1D3YXG0 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms